RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.31
TRAF3IP2-211ENST00000528599 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TRANK1O15050 2925 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 LGALS16A8MUM7 142 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HOXA2O43364 376 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 STX10O60499 249 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 THP07101 528 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GTF2H1P32780 548 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FMO5P49326 533 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ZACNQ401N2 412 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TDRD10Q5VZ19 366 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 NT5DC4Q86YG4 428 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TBKBP1A7MCY6 615 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PES1O00541 588 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TEX33O43247 280 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 B4GALT3O60512 393 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TMEM191BP0C7N4 346 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MXI1P50539 228 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 AP3M2P53677 418 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GRIK3Q13003 919 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SARM1Q6SZW1 724 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ABI1Q8IZP0 508 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 C1orf127Q8N9H9 656 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 URGCPQ8TCY9 931 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CACTINQ8WUQ7 758 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ANKRD36BP1Q96IX9 119 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GOLGA2P5Q9HBQ8 144 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 DPP3Q9NY33 737 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HCSTQ9UBK5 93 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CACNG4Q9UBN1 327 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SIX4Q9UIU6 781 aa13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-211ENST00000528599 LRRN2O75325 713 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 DDHD2O94830 711 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GJB5O95377 273 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 VNN1O95497 513 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TNNC2P02585 160 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TPM2P07951 284 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PBX2P40425 430 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 UBASH3AP57075 661 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MYL7Q01449 175 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 BIRC3Q13489 604 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 NR1I3Q14994 352 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PTPN21Q16825 1174 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 KRT39Q6A163 491 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ZNF280BQ86YH2 543 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 BEST2Q8NFU1 509 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TAS1R2Q8TE23 839 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PPEF2O14830 753 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PMM2O15305 246 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ITGB3P05106 788 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ATP2A2P16615 1042 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CYP3A5P20815 502 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 UBXN1Q04323 297 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 DSC1Q08554 894 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FILIP1LQ4L180 1135 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HERC6Q8IVU3 1022 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SLC9A7Q96T83 725 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ANO9A1A5B4 782 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CASTOR2A6NHX0 329 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 P4HA2O15460 535 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 XPOTO43592 962 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 N4BP1O75113 896 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PHACTR2O75167 634 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MYOGP15173 224 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 LRPAP1P30533 357 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RABGGTBP53611 331 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HTRA4P83105 476 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 KCNMA1Q12791 1236 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms