RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MRPL44Q9H9J2 332 aaKnown RBP35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 FBXW11Q9UKB1 542 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 CFAP45Q9UL16 551 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 CCDC195A0A1B0GUA6 201 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 C2CD4DB7Z1M9 353 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 SYN3O14994 580 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 TNFSF9P41273 254 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 POU5F1Q01860 360 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 ALCAMQ13740 583 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 SHC4Q6S5L8 630 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 GLYCTKQ8IVS8 523 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 ZDHHC14Q8IZN3 488 aa35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 TDRD5Q8NAT2 981 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 RPF1Q9H9Y2 349 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 CPSF3Q9UKF6 684 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 UBQLN1Q9UMX0 589 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-205ENST00000527920 VWA8A3KMH1 1905 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 COL9A1P20849 921 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 TKTP29401 623 aaKnown RBP35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 LRPAP1P30533 357 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 BRCC3P46736 316 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 RAB33AQ14088 237 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 PLCD3Q8N3E9 789 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 FEZF2Q8TBJ5 459 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 ZNF707Q96C28 371 aaPredicted RBP35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 KBTBD4Q9NVX7 518 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 TUBGCP4Q9UGJ1 667 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 EXOC7Q9UPT5 735 aa35.97■■■■□ 3.35
SSSCA1-205ENST00000527920 ANKRD63C9JTQ0 380 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 XPOTO43592 962 aaKnown RBP35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 RFPL2O75678 378 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 SPATA31D3P0C874 917 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 SP100P23497 879 aaPredicted RBP35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 PTPN21Q16825 1174 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 ZBTB41Q5SVQ8 909 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 SPATA31D4Q6ZUB0 917 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 IQUBQ8NA54 791 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 SPRYD3Q8NCJ5 442 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 KIF12Q96FN5 646 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 NUB1Q9Y5A7 615 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 PCDHB13Q9Y5F0 798 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 DENND4AQ7Z401 1863 aa35.96■■■■□ 3.35
SSSCA1-205ENST00000527920 LACTBL1A8MY62 500 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 ZMYND10O75800 440 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 IDEP14735 1019 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 ZXDAP98168 799 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 L1TD1Q5T7N2 865 aaKnown RBP35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 OTOP3Q7RTS5 596 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 SUSD3Q96L08 255 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 PRKD2Q9BZL6 878 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 WDR6Q9NNW5 1121 aaKnown RBP35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 PANK4Q9NVE7 773 aa35.95■■■■□ 3.35
SSSCA1-205ENST00000527920 PDCD11Q14690 1871 aaKnown RBP35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 I3L4J1 428 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 ADAM12O43184 909 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 POSTNQ15063 836 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 ADALQ6DHV7 355 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 CNNM4Q6P4Q7 775 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 RTL10Q7L3V2 364 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 SMG7Q92540 1137 aaKnown RBP35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 ACSF2Q96CM8 615 aaPredicted RBP35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 ACCSQ96QU6 501 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 MAGEF1Q9HAY2 307 aa35.94■■■■□ 3.34
SSSCA1-205ENST00000527920 HNRNPA1P09651 372 aaKnown RBP eCLIP35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 HOXA9P31269 272 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 OR1D2P34982 312 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 AMPD3Q01432 767 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 FOXD4L6Q3SYB3 417 aaPredicted RBP35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 LIN9Q5TKA1 542 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 SLC8B1Q6J4K2 584 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 FOXD4L3Q6VB84 417 aaPredicted RBP35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 CCDC65Q8IXS2 484 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 RCOR1Q9UKL0 485 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 AGO2Q9UKV8 859 aaKnown RBP35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 DERAQ9Y315 318 aa35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 MTCL1Q9Y4B5 1905 aaKnown RBP35.93■■■■□ 3.34
SSSCA1-205ENST00000527920 GCNT3O95395 438 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 ME1P48163 572 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 VARS2Q5ST30 1063 aaKnown RBP35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 STAMQ92783 540 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 TRIM9Q9C026 710 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 ASB7Q9H672 318 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 PCDHA7Q9UN72 937 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 CDY1Q9Y6F8 540 aa35.92■■■■□ 3.34
SSSCA1-205ENST00000527920 CLUHO75153 1309 aa35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 TISP43B9A030 160 aa35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 POU2F2P09086 479 aa35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 DNM1Q05193 864 aaKnown RBP35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 MRPL58Q14197 206 aaKnown RBP35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 TBC1D7Q9P0N9 293 aa35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 TECTAO75443 2155 aa35.91■■■■□ 3.34
SSSCA1-205ENST00000527920 C2orf16Q68DN1 1984 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 H7C4K7 107 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 TBC1D4O60343 1298 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 MYBP10242 640 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 ADSSP30520 456 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 MCM4P33991 863 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 AARSP49588 968 aaKnown RBP eCLIP35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 SPAG1Q07617 926 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 UVSSAQ2YD98 709 aa35.9■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms