RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	CASP5	P51878	434 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	SEC24C	P53992	1094 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	GJA9	P57773	515 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	PPP2R2A	P63151	447 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	TNFAIP2	Q03169	654 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	FAAP100	Q0VG06	881 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	FOXC1	Q12948	553 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	GIT2	Q14161	759 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	SPRED3	Q2MJR0	410 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	PREPL	Q4J6C6	727 aa	Predicted RBP	8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	OXLD1	Q5BKU9	147 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	FAM109B	Q6ICB4	259 aa	Predicted RBP	8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	CCSAP	Q6IQ19	270 aa	Predicted RBP	8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	RUFY4	Q6ZNE9	571 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	MAATS1	Q7Z4T9	603 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	CCDC91	Q7Z6B0	441 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	NELFCD	Q8IXH7	590 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	KLHL7	Q8IXQ5	586 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	CCDC13	Q8IYE1	715 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	PLPP7	Q8NBV4	271 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	LNX1	Q8TBB1	728 aa	Predicted RBP	8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	MAGEC3	Q8TD91	643 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	P3H4	Q92791	437 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	FGD4	Q96M96	766 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	GLT1D1	Q96MS3	346 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	KCTD15	Q96SI1	283 aa	Predicted RBP	8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	VRTN	Q9H8Y1	702 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	POLD4	Q9HCU8	107 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	SLC40A1	Q9NP59	571 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	FAM114A2	Q9NRY5	505 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	CYP39A1	Q9NYL5	469 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	ADAMTS1	Q9UHI8	967 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	CCPG1	Q9ULG6	757 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	DAAM1	Q9Y4D1	1078 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	ASTN1	O14525	1302 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	FRMPD4	Q14CM0	1322 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	ZMYM2	Q9UBW7	1377 aa		8.42	□□□□□ -1.06
SPIDR-223	ENST00000524033	CHD9	Q3L8U1	2897 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	IGSF9B	Q9UPX0	1349 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	NPHP3-ACAD11	A0A0J9YXS1	232 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	MYADML2	A6NDP7	307 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	FAM187A	A6NFU0	413 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	GCOM1	H8Y6P7	765 aa	Predicted RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	KIAA0355	O15063	1070 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	TBX3	O15119	743 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ADCY6	O43306	1168 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	CEP104	O60308	925 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	DNAJC8	O75937	253 aa	Predicted RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ICAM1	P05362	532 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	NUDT17	P0C025	328 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	MYZAP	P0CAP1	466 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ITGA4	P13612	1032 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	FER	P16591	822 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ITGB8	P26012	769 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	CST5	P28325	142 aa	Predicted RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	CDK7	P50613	346 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	HADHB	P55084	474 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	TCEAL1	Q15170	157 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	KNOP1	Q1ED39	458 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	EML3	Q32P44	896 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ANKRD20A8P	Q5CZ79	823 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	C9orf50	Q5SZB4	431 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	WLS	Q5T9L3	541 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ZNF697	Q5TEC3	545 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	DCAF12L1	Q5VU92	463 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	DUPD1	Q68J44	220 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	IQSEC1	Q6DN90	963 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	TTBK2	Q6IQ55	1244 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ALKBH5	Q6P6C2	394 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	BTNL9	Q6UXG8	535 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	NSMF	Q6X4W1	530 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	SFR1	Q86XK3	245 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	DDX42	Q86XP3	938 aa	Known RBP eCLIP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ADGRF4	Q8IZF3	695 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	SYT2	Q8N9I0	419 aa	Predicted RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	OR2W6P	Q8NHA6	318 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ETNPPL	Q8TBG4	499 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	CUL5	Q93034	780 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	FAM161B	Q96MY7	647 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	TACO1	Q9BSH4	297 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	C1QTNF2	Q9BXJ5	285 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ANO3	Q9BYT9	981 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	OSBPL7	Q9BZF2	842 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	PRKD2	Q9BZL6	878 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	AP5M1	Q9H0R1	490 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	GLT8D2	Q9H1C3	349 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	METTL14	Q9HCE5	456 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	LRRC4C	Q9HCJ2	640 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	VAT1L	Q9HCJ6	419 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	ZDHHC18	Q9NUE0	388 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	TYW1	Q9NV66	732 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	8.41	□□□□□ -1.06	4e-7	■■■■■ 38.1
SPIDR-223	ENST00000524033	PCDHB11	Q9Y5F2	797 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	SPTBN5	Q9NRC6	3674 aa	Known RBP	8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	XIRP2	A4UGR9	3374 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	DOCK3	Q8IZD9	2030 aa		8.41	□□□□□ -1.06
SPIDR-223	ENST00000524033	UBE4B	O95155	1302 aa		8.4	□□□□□ -1.06
SPIDR-223	ENST00000524033	MROH7	Q68CQ1	1323 aa		8.4	□□□□□ -1.06
SPIDR-223	ENST00000524033	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	8.4	□□□□□ -1.06
SPIDR-223	ENST00000524033	GOLGA6L10	A6NI86	522 aa		8.4	□□□□□ -1.06

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