RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 ROR1Q01973 937 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 SIM2Q14190 667 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 UPP1Q16831 310 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 SLC5A9Q2M3M2 681 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 FAM78AQ5JUQ0 283 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 NETO1Q8TDF5 533 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 PRMT8Q9NR22 394 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-206ENST00000520946 PIAS3Q9Y6X2 628 aa12.63□□□□□ -0.39
MRPS28-206ENST00000520946 ARHGEF37A1IGU5 675 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 PODXLO00592 558 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 RETP07949 1114 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 CPB1P15086 417 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 ATF2P15336 505 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
MRPS28-206ENST00000520946 LRRC32Q14392 662 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 ST3GAL2Q16842 350 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 HAUS3Q68CZ6 603 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 CEP68Q76N32 757 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 DIS3L2Q8IYB7 885 aaKnown RBP12.62□□□□□ -0.39
MRPS28-206ENST00000520946 DEPDC1BQ8WUY9 529 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 SMARCD2Q92925 531 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
MRPS28-206ENST00000520946 POLR3CQ9BUI4 534 aaPredicted RBP12.62□□□□□ -0.39
MRPS28-206ENST00000520946 CXCL16Q9H2A7 254 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 CHRDQ9H2X0 955 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 GOLGA2P5Q9HBQ8 144 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 ASAH2Q9NR71 780 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 TPCN1Q9ULQ1 816 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
MRPS28-206ENST00000520946 SMIM28A0A1B0GU29 152 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 DPYSL4O14531 572 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 SYN3O14994 580 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 MED24O75448 989 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 MICAL2O94851 1124 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 SPATA31C1P0DKV0 1188 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 CCNE1P24864 410 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 MCM4P33991 863 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 NAB2Q15742 525 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 ZNF568Q3ZCX4 644 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 PPM1JQ5JR12 505 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 TPGS2Q68CL5 300 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 IL31Q6EBC2 164 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 SLC8B1Q6J4K2 584 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 ZNF280DQ6N043 979 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 C1orf228Q6PIY5 440 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 LEMD2Q8NC56 503 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 APPL2Q8NEU8 664 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 BSNDQ8WZ55 320 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 NELL1Q92832 810 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 E2F7Q96AV8 911 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 TCEAL4Q96EI5 215 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 ACAP3Q96P50 834 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 MTMR9Q96QG7 549 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 KIFC3Q9BVG8 833 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 GPR88Q9GZN0 384 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 ZNF334Q9HCZ1 680 aaPredicted RBP12.61□□□□□ -0.39
MRPS28-206ENST00000520946 INSL5Q9Y5Q6 135 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.61□□□□□ -0.39
MRPS28-206ENST00000520946 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 CACNA1BQ00975 2339 aa12.61□□□□□ -0.39
MRPS28-206ENST00000520946 CEP250Q9BV73 2442 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 WDR27A2RRH5 827 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 LRP3O75074 770 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 ABLIM3O94929 683 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 HARSP12081 509 aaKnown RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 RPA1P27694 616 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 CCT6AP40227 531 aaKnown RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 VIPR2P41587 438 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.396e-6■■■■□ 21.9
MRPS28-206ENST00000520946 TWF1Q12792 350 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 HEATR6Q6AI08 1181 aaKnown RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 HAUS6Q7Z4H7 955 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 TCEAL8Q8IYN2 117 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 NECAB1Q8N987 351 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 ASB16Q96NS5 453 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 MRPL4Q9BYD3 311 aaKnown RBP12.6□□□□□ -0.39
MRPS28-206ENST00000520946 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 POLD4Q9HCU8 107 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 PHLPP2Q6ZVD8 1323 aa12.6□□□□□ -0.39
MRPS28-206ENST00000520946 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 ZNF292O60281 2723 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 COL4A3Q01955 1670 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 SLC30A4O14863 429 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 CTDNEP1O95476 244 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 ADRB1P08588 477 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 OR52Z1P0C646 297 aa12.59□□□□□ -0.39
MRPS28-206ENST00000520946 CNR2P34972 360 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms