RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 PDZD4Q76G19 769 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 ATP6V1E2Q96A05 226 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 L3MBTL1Q9Y468 752 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 SPATA31A6Q5VVP1 1343 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 KCNN4O15554 427 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 AGTP01019 485 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 RBP3P10745 1247 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 MAP7Q14244 749 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 DUOXA2Q1HG44 320 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 RTFDC1Q9BY42 306 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 MRPL46Q9H2W6 279 aaKnown RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 FAF1Q9UNN5 650 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 APOBEC2Q9Y235 224 aaKnown RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 KRT38O76015 456 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 PDGFRAP16234 1089 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 BRD2P25440 801 aaKnown RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 TYK2P29597 1187 aa13.8□□□□□ -0.2
PRDM16-208ENST00000514189 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 ORC2Q13416 577 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 PABPC3Q9H361 631 aaKnown RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 JPH1Q9HDC5 661 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-208ENST00000514189 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ESYT2A0FGR8 921 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 RNASELQ05823 741 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 TFDP2Q14188 446 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 VPS72Q15906 364 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 CYB5D1Q6P9G0 228 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 PID1Q7Z2X4 250 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 UNC45AQ9H3U1 944 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 NYAP2Q9P242 653 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 PCDHAC2Q9Y5I4 1007 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 LCP1P13796 627 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 GTF2H1P32780 548 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 GPC3P51654 580 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 PPP4CP60510 307 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ELOA2Q8IYF1 753 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ATP11CQ8NB49 1132 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ATG4CQ96DT6 458 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SUCLA2Q9P2R7 463 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 IP6K2Q9UHH9 426 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 GOLGA8CPA6NN73 597 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 CALB1P05937 261 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 EEF1B2P24534 225 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 GCLCP48506 637 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 DAB2IPQ5VWQ8 1189 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 LVRNQ6Q4G3 990 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ATP8B4Q8TF62 1192 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ACAP3Q96P50 834 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 CARD9Q9H257 536 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SUDS3Q9H7L9 328 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 STOML1Q9UBI4 398 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 AGAP1Q9UPQ3 857 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SNX9Q9Y5X1 595 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 PFASO15067 1338 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 EML1O00423 815 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 PGM1P36871 562 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 STAT5BP51692 787 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 CCDC117Q8IWD4 279 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 THTPAQ9BU02 230 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 PARVAQ9NVD7 372 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 HAO1Q9UJM8 370 aa13.79□□□□□ -0.2
PRDM16-208ENST00000514189 REXO2Q9Y3B8 237 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 MRPL42Q9Y6G3 142 aaKnown RBP13.79□□□□□ -0.2
PRDM16-208ENST00000514189 ZBBXA8MT70 800 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 NFIBO00712 420 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 GGPS1O95749 300 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 ATG16L1Q676U5 607 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 EMC1Q8N766 993 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 FAM71DQ8N9W8 422 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 C1orf131Q8NDD1 294 aaKnown RBP13.78□□□□□ -0.2
PRDM16-208ENST00000514189 CEP70Q8NHQ1 597 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 TATDN2Q93075 761 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 LRGUKQ96M69 825 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-208ENST00000514189 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
PRDM16-208ENST00000514189 SUPT20HL1Q3ZLR7 823 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 GPAT2Q6NUI2 795 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 IRF2BP1Q8IU81 584 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 TEX2Q8IWB9 1127 aa13.78□□□□□ -0.2
PRDM16-208ENST00000514189 SPATA18Q8TC71 538 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms