RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ITGB5P18084 799 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 TMOD1P28289 359 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 HOXD12P35452 270 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 DMC1Q14565 340 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 PKDCCQ504Y2 493 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 PRSS36Q5K4E3 855 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 FAM160B1Q5W0V3 765 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 PADI6Q6TGC4 694 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 RTL10Q7L3V2 364 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 HAUS6Q7Z4H7 955 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 ZSCAN18Q8TBC5 510 aaPredicted RBP8.59□□□□□ -1.03
CLDND1-229ENST00000513988 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 E2F7Q96AV8 911 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 ZSWIM3Q96MP5 696 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 CLSTN3Q9BQT9 956 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 TRPV4Q9HBA0 871 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 GTSE1Q9NYZ3 720 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 HSPBP1Q9NZL4 362 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 TNNQ9UQP3 1299 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 PCDHB2Q9Y5E7 798 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 BOD1L1Q8NFC6 3051 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 PALM3A6NDB9 673 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-229ENST00000513988 PLK4O00444 970 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 MICAL2O94851 1124 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SYPP08247 313 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SERPINF2P08697 491 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 CT47B1P0C2W7 299 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SFPQP23246 707 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLDND1-229ENST00000513988 PTGER3P43115 390 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 GPC3P51654 580 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 PSMD5Q16401 504 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 RTP2Q5QGT7 225 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 LYSMD4Q5XG99 296 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 FSTL4Q6MZW2 842 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 EFCAB12Q6NXP0 572 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 ATG14Q6ZNE5 492 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 PDZD4Q76G19 769 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SYT13Q7L8C5 426 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 CKAP2LQ8IYA6 745 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 LRRC71Q8N4P6 559 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 TSTD1Q8NFU3 115 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SMARCC2Q8TAQ2 1214 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SEC62Q99442 399 aaKnown RBP8.58□□□□□ -1.04
CLDND1-229ENST00000513988 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 KAT14Q9H8E8 782 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 ADAM28Q9UKQ2 775 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 NF1P21359 2839 aa8.58□□□□□ -1.04
CLDND1-229ENST00000513988 TNRC6BQ9UPQ9 1833 aaKnown RBP8.58□□□□□ -1.04
CLDND1-229ENST00000513988 MAGEB2O15479 319 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 MAFGO15525 162 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 ADAM12O43184 909 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 CBFA2T3O75081 653 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 LRG1P02750 347 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 SLFN5Q08AF3 891 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 FCHO2Q0JRZ9 810 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 CCDC173Q0VFZ6 552 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 NFATC3Q12968 1075 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 TMEM196Q5HYL7 178 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 CYP4A22Q5TCH4 519 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 ARHGAP40Q5TG30 622 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 CEP85Q6P2H3 762 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 RABEPKQ7Z6M1 372 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 SPACA3Q8IXA5 215 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 TMEM57Q8N5G2 664 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 DAGLBQ8NCG7 672 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 SNIP1Q8TAD8 396 aaKnown RBP8.57□□□□□ -1.04
CLDND1-229ENST00000513988 CUL5Q93034 780 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 ACDQ96AP0 544 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 MTMR8Q96EF0 704 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 TTPALQ9BTX7 342 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 GCOM2Q9BZD3 368 aaPredicted RBP8.57□□□□□ -1.04
CLDND1-229ENST00000513988 SLITRK6Q9H5Y7 841 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 PCOLCE2Q9UKZ9 415 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 AK5Q9Y6K8 562 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 PCDH15Q96QU1 1955 aa8.57□□□□□ -1.04
CLDND1-229ENST00000513988 CACNA1DQ01668 2161 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 SF3B1O75533 1304 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 TADA2AO75478 443 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 AFPP02771 609 aaKnown RBP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 ATXN1LP0C7T5 689 aaKnown RBP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 ITPKAP23677 461 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 CCR2P41597 374 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 TMPRSS3P57727 454 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 DSC1Q08554 894 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 RAB33AQ14088 237 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 PTPAQ15257 358 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 ARHGAP29Q52LW3 1261 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 C6orf118Q5T5N4 469 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms