RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 PPP4R3AQ6IN85 833 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 MED25Q71SY5 747 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 PLXDC1Q8IUK5 500 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 RHOT2Q8IXI1 618 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 SYNE4Q8N205 404 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 CHMP4CQ96CF2 233 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 MYOCQ99972 504 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 TCF7L1Q9HCS4 588 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 AKIP1Q9NQ31 210 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 TDP1Q9NUW8 608 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.03□□□□□ -1.44
PDE4D-220ENST00000512069 HS3ST4Q9Y661 456 aa6.03□□□□□ -1.44
PDE4D-220ENST00000512069 PPRC1Q5VV67 1664 aaKnown RBP6.03□□□□□ -1.44
PDE4D-220ENST00000512069 FGD5Q6ZNL6 1462 aa6.02□□□□□ -1.44
PDE4D-220ENST00000512069 SPATA31D1Q6ZQQ2 1576 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 SNUPNO95149 360 aaKnown RBP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 ZRANB2O95218 330 aaKnown RBP eCLIP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 RPLP2P05387 115 aaKnown RBP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 SPATA31D3P0C874 917 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 TARDBPQ13148 414 aaKnown RBP eCLIP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 IL10RAQ13651 578 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 ATP2B3Q16720 1220 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 C3orf36Q3SXR2 165 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 TMEM240Q5SV17 173 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 ZNF529Q6P280 563 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 SPATA31D4Q6ZUB0 917 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 CMTR2Q8IYT2 770 aaKnown RBP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 CHFRQ96EP1 664 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 MRGPRX4Q96LA9 322 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 DMRTA2Q96SC8 542 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 NEU1Q99519 415 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 SMAD5Q99717 465 aaKnown RBP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 IKZF4Q9H2S9 585 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 DDX56Q9NY93 547 aaKnown RBP6.02□□□□□ -1.45
PDE4D-220ENST00000512069 CALCOCO1Q9P1Z2 691 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 SERPINB13Q9UIV8 391 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 ATP11BQ9Y2G3 1177 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 PCDHB1Q9Y5F3 818 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 ADCY10Q96PN6 1610 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 CCDC88BA6NC98 1476 aa6.02□□□□□ -1.45
PDE4D-220ENST00000512069 NUP160Q12769 1436 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 TOP2BQ02880 1626 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 SUV39H1O43463 412 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 GCSHP23434 173 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 DPTQ07507 201 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 RAB39AQ14964 217 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 TIGD2Q4W5G0 525 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 LY6G5CQ5SRR4 150 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 TSHZ3Q63HK5 1081 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 RSPH3Q86UC2 560 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 MIER2Q8N344 545 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 CPA6Q8N4T0 437 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 NLGN4YQ8NFZ3 816 aaPredicted RBP6.01□□□□□ -1.45
PDE4D-220ENST00000512069 IFI44Q8TCB0 444 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 STAG1Q8WVM7 1258 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 TEX101Q9BY14 249 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 REXO4Q9GZR2 422 aaKnown RBP6.01□□□□□ -1.45
PDE4D-220ENST00000512069 KLHL11Q9NVR0 708 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 FBXO34Q9NWN3 711 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 USP15Q9Y4E8 981 aaPredicted RBP6.01□□□□□ -1.45
PDE4D-220ENST00000512069 CFAP20Q9Y6A4 193 aaKnown RBP6.01□□□□□ -1.45
PDE4D-220ENST00000512069 GRIN2AQ12879 1464 aa6.01□□□□□ -1.45
PDE4D-220ENST00000512069 NCR1O76036 304 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 HLA-DOAP06340 250 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 PDGFRBP09619 1106 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 CKBP12277 381 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 ALAS1P13196 640 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 NEK2P51955 445 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 DSC2Q02487 901 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 BEAN1Q3B7T3 259 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 LRRC55Q6ZSA7 311 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 TTC7BQ86TV6 843 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 ZBTB46Q86UZ6 589 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 ARHGEF19Q8IW93 802 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 PRR18Q8N4B5 295 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 IL17RDQ8NFM7 739 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 PHACTR3Q96KR7 559 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 PRRX2Q99811 253 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 C11orf54Q9H0W9 315 aaPredicted RBP6□□□□□ -1.45
PDE4D-220ENST00000512069 GSTO2Q9H4Y5 243 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 FPGT-TNNI3KV9GXZ4 949 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 COL4A3Q01955 1670 aa6□□□□□ -1.45
PDE4D-220ENST00000512069 ABCA5Q8WWZ7 1642 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 NDUFA10O95299 355 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 ABHD16AO95870 558 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 MTHFD1P11586 935 aaKnown RBP5.99□□□□□ -1.45
PDE4D-220ENST00000512069 KRT4P19013 534 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 PDCP20941 246 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 CREMQ03060 361 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 UAP1L1Q3KQV9 507 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 ARMC6Q6NXE6 501 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 Q6ZPA2 131 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 UBE3BQ7Z3V4 1068 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 LDLRAD3Q86YD5 345 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 FITM2Q8N6M3 262 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 OR56A1Q8NGH5 318 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 NSUN6Q8TEA1 469 aaKnown RBP5.99□□□□□ -1.45
PDE4D-220ENST00000512069 TMX3Q96JJ7 454 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 CLPTM1LQ96KA5 538 aa5.99□□□□□ -1.45
PDE4D-220ENST00000512069 MLST8Q9BVC4 326 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms