RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 ENOSF1Q7L5Y1 443 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 TRAPPC11Q7Z392 1133 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
RFC1-211ENST00000509084 SPC24Q8NBT2 197 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 OR5B17Q8NGF7 314 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 TAF4BQ92750 862 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 ABHD8Q96I13 439 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 FAXDC2Q96IV6 333 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 NT5C1BQ96P26 610 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 POP1Q99575 1024 aaKnown RBP11.2□□□□□ -0.62
RFC1-211ENST00000509084 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 OSBPL7Q9BZF2 842 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 MTMR12Q9C0I1 747 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 NUCKS1Q9H1E3 243 aaKnown RBP11.2□□□□□ -0.62
RFC1-211ENST00000509084 FAM207AQ9NSI2 230 aaPredicted RBP11.2□□□□□ -0.62
RFC1-211ENST00000509084 CEP72Q9P209 647 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 APEX2Q9UBZ4 518 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 HES2Q9Y543 173 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 PDCD11Q14690 1871 aaKnown RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 PTPRJQ12913 1337 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 ABHD14A-ACY1A0A1B0GW23 586 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 TRIM43BA6NCK2 446 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 AKR1B15C9JRZ8 316 aaPredicted RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 INPPL1O15357 1258 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 BAIAP3O94812 1187 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 HLA-DRAP01903 254 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 GYPCP04921 128 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 ATF7P17544 494 aaPredicted RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 SLC9A1P19634 815 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 ATICP31939 592 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 ZBED6P86452 979 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 GRIK3Q13003 919 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 PPIGQ13427 754 aaKnown RBP eCLIP11.19□□□□□ -0.62
RFC1-211ENST00000509084 ZBTB6Q15916 424 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 SGSM1Q2NKQ1 1148 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 KLHDC7AQ5VTJ3 777 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 LMBRD2Q68DH5 695 aaPredicted RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 GLB1LQ6UWU2 654 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 DEFB128Q7Z7B8 93 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 URGCPQ8TCY9 931 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 TRIM43Q96BQ3 446 aaPredicted RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 TTYH3Q9C0H2 523 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 GANQ9H2C0 597 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 DPP3Q9NY33 737 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 CAPN11Q9UMQ6 739 aa11.19□□□□□ -0.62
RFC1-211ENST00000509084 LUC7L2Q9Y383 392 aaKnown RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 KIAA0100Q14667 2235 aaKnown RBP11.19□□□□□ -0.62
RFC1-211ENST00000509084 SMIM28A0A1B0GU29 152 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 ENPP3O14638 875 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 MEFVO15553 781 aaPredicted RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 MFAP3LO75121 409 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 ITGB3P05106 788 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 THP07101 528 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 P4HA1P13674 534 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 UCHL3P15374 230 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 TBXAS1P24557 533 aaPredicted RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 MLH1P40692 756 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 PNPLA4P41247 253 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 RBP5P82980 135 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 GCNT1Q02742 428 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 NPAS4Q8IUM7 802 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 ABI1Q8IZP0 508 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 LRRC52Q8N7C0 313 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 C1orf127Q8N9H9 656 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 RNF169Q8NCN4 708 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 LMO3Q8TAP4 145 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 JAKMIP2Q96AA8 810 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 ZNF560Q96MR9 790 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 PPP1R10Q96QC0 940 aaKnown RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 SPAG5Q96R06 1193 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 MRPL9Q9BYD2 267 aaKnown RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 VRTNQ9H8Y1 702 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 IL23AQ9NPF7 189 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
RFC1-211ENST00000509084 PCDHB7Q9Y5E2 793 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
RFC1-211ENST00000509084 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 ARL5CA6NH57 179 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 PTGESO14684 152 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 EVI5O60447 810 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 CLSTN1O94985 981 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 VNN1O95497 513 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 ASS1P00966 412 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 KRT19P08727 400 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 PAX3P23760 479 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms