RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 DOCK8Q8NF50 2099 aa13.24□□□□□ -0.29
CLDND1-218ENST00000508503 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 FRMD3A2A2Y4 597 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 ANKRD63C9JTQ0 380 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 PODXLO00592 558 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 SYN3O14994 580 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 N4BP1O75113 896 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 YEATS4O95619 227 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 TKTP29401 623 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 HOXA9P31269 272 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 OR1D2P34982 312 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 BRCC3P46736 316 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 LIG4P49917 911 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 CCDC149Q6ZUS6 474 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 UBALD2Q8IYN6 164 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 TDRD5Q8NAT2 981 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 SMG7Q92540 1137 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 HVCN1Q96D96 273 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 SUSD3Q96L08 255 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 MFSD14AQ96MC6 490 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
CLDND1-218ENST00000508503 TFIP11Q9UBB9 837 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 CPSF3Q9UKF6 684 aaKnown RBP13.23□□□□□ -0.29
CLDND1-218ENST00000508503 LACTBL1A8MY62 500 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 K7ENM7 598 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 HNRNPDLO14979 420 aaKnown RBP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 SPTLC2O15270 562 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 ABLIM3O94929 683 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 CXCL8P10145 99 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 HARSP12081 509 aaKnown RBP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 GAP43P17677 238 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 SP100P23497 879 aaPredicted RBP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 TXLNAP40222 546 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 TNFSF9P41273 254 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 ATL3Q6DD88 541 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 DYMQ7RTS9 669 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 GLYCTKQ8IVS8 523 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 CD302Q8IX05 232 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 BICD1Q96G01 975 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 ZNF396Q96N95 335 aaPredicted RBP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 OLFML3Q9NRN5 406 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 EPS15L1Q9UBC2 864 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 UBQLN1Q9UMX0 589 aaKnown RBP13.22□□□□□ -0.29
CLDND1-218ENST00000508503 HCN4Q9Y3Q4 1203 aa13.22□□□□□ -0.29
CLDND1-218ENST00000508503 MYH15Q9Y2K3 1946 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 CLUHO75153 1309 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 I3L4J1 428 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 M0QZQ0 153 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 ZSCAN22P10073 491 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-218ENST00000508503 MYBP10242 640 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 ADSSP30520 456 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 STK38Q15208 465 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 E2F4Q16254 413 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
CLDND1-218ENST00000508503 ZBTB41Q5SVQ8 909 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-218ENST00000508503 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 SLFN12LQ6IEE8 588 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 SFR1Q86XK3 245 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 HSCBQ8IWL3 235 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 ZNF461Q8TAF7 563 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 STAMQ92783 540 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 NXPE3Q969Y0 559 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 PBXIP1Q96AQ6 731 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 PANK2Q9BZ23 570 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 ZHX3Q9H4I2 956 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 ASB7Q9H672 318 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.29
CLDND1-218ENST00000508503 KBTBD4Q9NVX7 518 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLDND1-218ENST00000508503 IGSF9Q9P2J2 1179 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 CDY1Q9Y6F8 540 aa13.21□□□□□ -0.29
CLDND1-218ENST00000508503 PIEZO1Q92508 2521 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 NOTCH4Q99466 2003 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 CUTAO60888 179 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 ASGR2P07307 311 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 PAX3P23760 479 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLDND1-218ENST00000508503 MTMR3Q13615 1198 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 POSTNQ15063 836 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 CRELD2Q6UXH1 353 aaPredicted RBP13.2□□□□□ -0.3
CLDND1-218ENST00000508503 FBXL6Q8N531 539 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 MYADMQ96S97 322 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 MSTO1Q9BUK6 570 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 KCNK12Q9HB15 430 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 MAFFQ9ULX9 164 aa13.2□□□□□ -0.3
CLDND1-218ENST00000508503 DERAQ9Y315 318 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms