RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 CNTN3Q9P232 1028 aa17.34■□□□□ 0.37
SSBP2-207ENST00000507472 DNMT3BQ9UBC3 853 aaKnown RBP17.34■□□□□ 0.37
SSBP2-207ENST00000507472 SMC3Q9UQE7 1217 aa17.34■□□□□ 0.37
SSBP2-207ENST00000507472 CLDN3O15551 220 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 MCM2P49736 904 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 GPC5P78333 572 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 VARS2Q5ST30 1063 aaKnown RBP17.33■□□□□ 0.36
SSBP2-207ENST00000507472 LARP1BQ659C4 914 aaKnown RBP17.33■□□□□ 0.36
SSBP2-207ENST00000507472 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 ZPBP2Q6X784 338 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 RTL10Q7L3V2 364 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 CCDC105Q8IYK2 499 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 DTWD2Q8NBA8 298 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 ZNF461Q8TAF7 563 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 TBC1D17Q9HA65 648 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.36
SSBP2-207ENST00000507472 SLC2A4RGQ9NR83 387 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 KCND2Q9NZV8 630 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 NUB1Q9Y5A7 615 aa17.33■□□□□ 0.36
SSBP2-207ENST00000507472 SPTBN4Q9H254 2564 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 TBC1D4O60343 1298 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 POU2F2P09086 479 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 NBL1P41271 181 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 ARPP19P56211 112 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 ROR1Q01973 937 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 MCL1Q07820 350 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 NOLC1Q14978 699 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSBP2-207ENST00000507472 PABPC1LQ4VXU2 614 aaKnown RBP17.32■□□□□ 0.36
SSBP2-207ENST00000507472 HAPLN2Q9GZV7 340 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 EP300Q09472 2414 aaPredicted RBP17.32■□□□□ 0.36
SSBP2-207ENST00000507472 DMDP11532 3685 aa17.32■□□□□ 0.36
SSBP2-207ENST00000507472 SYN3O14994 580 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 ABLIM3O94929 683 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 RFX1P22670 979 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 ELF1P32519 619 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 UBA7P41226 1012 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 MRPL58Q14197 206 aaKnown RBP17.31■□□□□ 0.36
SSBP2-207ENST00000507472 DHX8Q14562 1220 aaKnown RBP17.31■□□□□ 0.36
SSBP2-207ENST00000507472 ANGPT1Q15389 498 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 ASCL5Q7RTU5 278 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 HAUS6Q7Z4H7 955 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 AK8Q96MA6 479 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 ARHGEF3Q9NR81 526 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
SSBP2-207ENST00000507472 KCNH3Q9ULD8 1083 aa17.31■□□□□ 0.36
SSBP2-207ENST00000507472 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
SSBP2-207ENST00000507472 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
SSBP2-207ENST00000507472 GVINP1Q7Z2Y8 2422 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 WDR27A2RRH5 827 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 H7C4K7 107 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 PRRG1O14668 218 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 CLTAP09496 248 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 CXCL8P10145 99 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 ATF2P15336 505 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 MATR3P43243 847 aaKnown RBP eCLIP17.3■□□□□ 0.36
SSBP2-207ENST00000507472 NCKAP1LP55160 1127 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 SPAG1Q07617 926 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 PHLDB3Q6NSJ2 640 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 MTSS1LQ765P7 747 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 FRMD5Q7Z6J6 570 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 GPBP1Q86WP2 473 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 TMEM130Q8N3G9 435 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 ING5Q8WYH8 240 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 BICD1Q96G01 975 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 REEP2Q9BRK0 252 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 FBXL5Q9UKA1 691 aa17.3■□□□□ 0.36
SSBP2-207ENST00000507472 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 ARHGEF37A1IGU5 675 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 H0YCG3 227 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 SLC26A4O43511 780 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 SEC24AO95486 1093 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 RHOP08100 348 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 MCM4P33991 863 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 GRIN1Q05586 938 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 SLC5A9Q2M3M2 681 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 CTXN3Q4LDR2 81 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 SPECC1Q5M775 1068 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 MYCT1Q8N699 235 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 CYP4F11Q9HBI6 524 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 ODF2LQ9ULJ1 636 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 SIT1Q9Y3P8 196 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 NOTCH4Q99466 2003 aa17.29■□□□□ 0.36
SSBP2-207ENST00000507472 PRR23AA6NEV1 266 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 LRG1P02750 347 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 DCNP07585 359 aaKnown RBP17.28■□□□□ 0.36
SSBP2-207ENST00000507472 PTPN2P17706 415 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 TNFSF9P41273 254 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 LIG4P49917 911 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 STARD6P59095 220 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 SNW1Q13573 536 aaKnown RBP17.28■□□□□ 0.36
SSBP2-207ENST00000507472 MCM6Q14566 821 aa17.28■□□□□ 0.36
SSBP2-207ENST00000507472 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms