RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 NAPGQ99747 312 aaPredicted RBP10.05□□□□□ -0.8
NEK1-203ENST00000507142 PI4K2AQ9BTU6 479 aa10.05□□□□□ -0.8
NEK1-203ENST00000507142 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 RECQL4O94761 1208 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 LHX1P48742 406 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 VPS41P49754 854 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 GIT2Q14161 759 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 RAB30Q15771 203 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CLUL1Q15846 466 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 GOLGA7BQ2TAP0 167 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ARHGAP18Q8N392 663 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 IPO11Q9UI26 975 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 SMIM23A6NLE4 172 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 KIF3CO14782 793 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 SERPING1P05155 500 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ADH1AP07327 375 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 LAG3P18627 525 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 GUCY2CP25092 1073 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ATP11AP98196 1134 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 GRIN1Q05586 938 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ANO4Q32M45 955 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CEP112Q8N8E3 955 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 MED15Q96RN5 788 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 PAIP2Q9BPZ3 127 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 SYNDIG1Q9H7V2 258 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 SP110Q9HB58 689 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CNOT8Q9UFF9 292 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 IPPQ9Y573 584 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 IRS2Q9Y4H2 1338 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CRCPO75575 148 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 RBL2Q08999 1139 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 PTK7Q13308 1070 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 GEN1Q17RS7 908 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 RBBP8NLQ8NC74 664 aaPredicted RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 DHX38Q92620 1227 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 TMEM8AQ9HCN3 771 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 AGPAT3Q9NRZ7 376 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 FEZ2Q9UHY8 353 aaPredicted RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 RWDD3Q9Y3V2 267 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 PCDHB5Q9Y5E4 795 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 RASSF10A6NK89 507 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 MAFO75444 373 aaPredicted RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 TM4SF4P48230 202 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ZNF467Q7Z7K2 595 aaPredicted RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 UBA3Q8TBC4 463 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CLEC4DQ8WXI8 215 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 TRIB2Q92519 343 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 HES2Q9Y543 173 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 A0A1W2PQ45 241 aaPredicted RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 A0A1W2PQY0 241 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 SNHG28P0DPA3 235 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CKBP12277 381 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 ACO1P21399 889 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 CREMQ03060 361 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 MTFR1Q15390 333 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 TMCO3Q6UWJ1 677 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CCDC149Q6ZUS6 474 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 CBWD2Q8IUF1 395 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 UCMAQ8WVF2 138 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 SUDS3Q9H7L9 328 aaPredicted RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 SAGE1Q9NXZ1 904 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 SPG21Q9NZD8 308 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 SAMD15Q9P1V8 674 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 UTP11Q9Y3A2 253 aaKnown RBP10.04□□□□□ -0.8
NEK1-203ENST00000507142 PASKQ96RG2 1323 aa10.04□□□□□ -0.8
NEK1-203ENST00000507142 NHSQ6T4R5 1651 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 C4AP0C0L4 1744 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 CYP26A1O43174 497 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 PSMD10O75832 226 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 GARTP22102 1010 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 JAG1P78504 1218 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 KIAA1755Q5JYT7 1200 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 ASAP3Q8TDY4 903 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 DESI2Q9BSY9 194 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 MUC3BQ9H195 1237 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 DDX43Q9NXZ2 648 aaKnown RBP10.03□□□□□ -0.8
NEK1-203ENST00000507142 PADI3Q9ULW8 664 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 SCN11AQ9UI33 1791 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 DNM1LO00429 736 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 MCF2LO15068 1137 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 SH3BP5O60239 455 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 SF3B1O75533 1304 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■■■■■ 58.5
NEK1-203ENST00000507142 SGPL1O95470 568 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 DARS2Q6PI48 645 aaKnown RBP10.03□□□□□ -0.8
NEK1-203ENST00000507142 ACOT1Q86TX2 421 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 PXYLP1Q8TE99 480 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.03□□□□□ -0.8
NEK1-203ENST00000507142 ACSF2Q96CM8 615 aaPredicted RBP10.03□□□□□ -0.8
NEK1-203ENST00000507142 TTC1Q99614 292 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
NEK1-203ENST00000507142 ORC1Q13415 861 aa10.03□□□□□ -0.8
NEK1-203ENST00000507142 CBWD1Q9BRT8 395 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms