RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 GPATCH3Q96I76 525 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 BOD1Q96IK1 185 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 FAM126AQ9BYI3 521 aaPredicted RBP3.38□□□□□ -1.87
RBM39-242ENST00000498280 BCO1Q9HAY6 547 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 TMEM74BQ9NUR3 256 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 SCOCQ9UIL1 159 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 KCNG1Q9UIX4 513 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 PRKAB1Q9Y478 270 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 NOX1Q9Y5S8 564 aa3.38□□□□□ -1.87
RBM39-242ENST00000498280 WIPF3A6NGB9 483 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 GPANK1O95872 356 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 ENPP1P22413 925 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 GCSHP23434 173 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 SLC6A9P48067 706 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 OCRLQ01968 901 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 SRSF4Q08170 494 aaKnown RBP3.37□□□□□ -1.87
RBM39-242ENST00000498280 SEPT2Q15019 361 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.37□□□□□ -1.87
RBM39-242ENST00000498280 SPDYE7PQ495Y7 208 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 KIAA1614Q5VZ46 1190 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 ZNF529Q6P280 563 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 RNF180Q86T96 592 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 C11orf74Q86VG3 221 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 PPM1KQ8N3J5 372 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 Q8NA96 180 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 DPF1Q92782 380 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 HEPHQ9BQS7 1158 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 QRSL1Q9H0R6 528 aaKnown RBP3.37□□□□□ -1.87
RBM39-242ENST00000498280 GALNT9Q9HCQ5 603 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 SLC17A6Q9P2U8 582 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 AJAP1Q9UKB5 411 aaPredicted RBP3.37□□□□□ -1.87
RBM39-242ENST00000498280 ACTL7AQ9Y615 435 aa3.37□□□□□ -1.87
RBM39-242ENST00000498280 KCNAB3O43448 404 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 VIL1P09327 827 aaKnown RBP3.36□□□□□ -1.87
RBM39-242ENST00000498280 BPIP17213 487 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 ATP5JP18859 108 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 CNGA1P29973 690 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 GUCY1A2P33402 732 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 VAV2P52735 878 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 AMPD3Q01432 767 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 SLFN5Q08AF3 891 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 EZH2Q15910 746 aaKnown RBP3.36□□□□□ -1.87
RBM39-242ENST00000498280 ADRM1Q16186 407 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 PTPROQ16827 1216 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.36□□□□□ -1.87
RBM39-242ENST00000498280 ZNF788Q6ZQV5 615 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 TSHZ1Q6ZSZ6 1077 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 GRASPQ7Z6J2 395 aaPredicted RBP3.36□□□□□ -1.87
RBM39-242ENST00000498280 STRA8Q7Z7C7 330 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 PQLC1Q8N2U9 271 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 OR2I1PQ8NGU4 316 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 SSH3Q8TE77 659 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 CHAC2Q8WUX2 184 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 RNPEPQ9H4A4 650 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 TBCCD1Q9NVR7 557 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 KCTD5Q9NXV2 234 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 ARPP21Q9UBL0 812 aaPredicted RBP3.36□□□□□ -1.87
RBM39-242ENST00000498280 MAPRE3Q9UPY8 281 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 RUVBL1Q9Y265 456 aaKnown RBP3.36□□□□□ -1.87
RBM39-242ENST00000498280 COL4A3BPQ9Y5P4 624 aa3.36□□□□□ -1.87
RBM39-242ENST00000498280 TCRBV7S2A1N4TA0A589 114 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 WDR91A4D1P6 747 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 PHF2O75151 1096 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 POMCP01189 267 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 AMY1AP04745 511 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 ECHS1P30084 290 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 SP140Q13342 867 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 SF3B3Q15393 1217 aaKnown RBP3.35□□□□□ -1.87
RBM39-242ENST00000498280 MUM1Q2TAK8 710 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 KRT26Q7Z3Y9 468 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 KCNK18Q7Z418 384 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 DRC7Q8IY82 874 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 AHI1Q8N157 1196 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 ZGPATQ8N5A5 531 aaKnown RBP3.35□□□□□ -1.87
RBM39-242ENST00000498280 UHRF1Q96T88 793 aaPredicted RBP3.35□□□□□ -1.87
RBM39-242ENST00000498280 CAAP1Q9H8G2 361 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 PCDH12Q9NPG4 1184 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 KCNE5Q9UJ90 142 aa3.35□□□□□ -1.87
RBM39-242ENST00000498280 MTO1Q9Y2Z2 717 aaKnown RBP3.35□□□□□ -1.87
RBM39-242ENST00000498280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.34□□□□□ -1.87
RBM39-242ENST00000498280 MANSC4A6NHS7 340 aaPredicted RBP3.34□□□□□ -1.87
RBM39-242ENST00000498280 CBSLP0DN79 551 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 CKBP12277 381 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 FCER1AP12319 257 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 GSPT1P15170 499 aaKnown RBP3.34□□□□□ -1.87
RBM39-242ENST00000498280 NCLP19338 710 aaKnown RBP3.34□□□□□ -1.87
RBM39-242ENST00000498280 SLC6A4P31645 630 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 CBSP35520 551 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 SOX5P35711 763 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 PER3P56645 1201 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 SCAND1P57086 179 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 STRN3Q13033 797 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 CT47A1Q5JQC4 288 aaPredicted RBP3.34□□□□□ -1.87
RBM39-242ENST00000498280 TOR2AQ5JU69 321 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 ZNF425Q6IV72 752 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 FAM43AQ8N2R8 423 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 LNX2Q8N448 690 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 AFAP1L2Q8N4X5 818 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 LMBR1Q8WVP7 490 aa3.34□□□□□ -1.87
RBM39-242ENST00000498280 TFAP2BQ92481 460 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms