RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
MRPL55-232ENST00000495434 RPF1Q9H9Y2 349 aaKnown RBP15.28■□□□□ 0.04
MRPL55-232ENST00000495434 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
MRPL55-232ENST00000495434 MTRRQ9UBK8 725 aa15.28■□□□□ 0.04
MRPL55-232ENST00000495434 CDH22Q9UJ99 828 aa15.28■□□□□ 0.04
MRPL55-232ENST00000495434 CPSF3Q9UKF6 684 aaKnown RBP15.28■□□□□ 0.04
MRPL55-232ENST00000495434 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
MRPL55-232ENST00000495434 BACE2Q9Y5Z0 518 aa15.28■□□□□ 0.04
MRPL55-232ENST00000495434 SYN3O14994 580 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 WEE2P0C1S8 567 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 RPL17P18621 184 aaKnown RBP15.27■□□□□ 0.04
MRPL55-232ENST00000495434 LRPAP1P30533 357 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 TNFSF9P41273 254 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 AMPD3Q01432 767 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 PKP1Q13835 747 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 RAB33AQ14088 237 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 ENOX2Q16206 610 aaKnown RBP15.27■□□□□ 0.04
MRPL55-232ENST00000495434 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.04
MRPL55-232ENST00000495434 CNNM4Q6P4Q7 775 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 SHC4Q6S5L8 630 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 PDILTQ8N807 584 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 IQUBQ8NA54 791 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 KREMEN2Q8NCW0 462 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.04
MRPL55-232ENST00000495434 MAGEF1Q9HAY2 307 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 PANK4Q9NVE7 773 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 FBXW11Q9UKB1 542 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 UBQLN1Q9UMX0 589 aaKnown RBP15.27■□□□□ 0.04
MRPL55-232ENST00000495434 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
MRPL55-232ENST00000495434 MYO10Q9HD67 2058 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 LACTBL1A8MY62 500 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 C2CD4DB7Z1M9 353 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 ANKRD63C9JTQ0 380 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 ZMYND10O75800 440 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 IDEP14735 1019 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 PAX3P23760 479 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
MRPL55-232ENST00000495434 TKTP29401 623 aaKnown RBP15.26■□□□□ 0.03
MRPL55-232ENST00000495434 HOXA9P31269 272 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 BRCC3P46736 316 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 UVSSAQ2YD98 709 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
MRPL55-232ENST00000495434 CCDC149Q6ZUS6 474 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 OTOP3Q7RTS5 596 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 GLYCTKQ8IVS8 523 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 CCDC65Q8IXS2 484 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
MRPL55-232ENST00000495434 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 SUSD3Q96L08 255 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 PRKD2Q9BZL6 878 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 ASB7Q9H672 318 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 WDR6Q9NNW5 1121 aaKnown RBP15.26■□□□□ 0.03
MRPL55-232ENST00000495434 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 RCOR1Q9UKL0 485 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 AGO2Q9UKV8 859 aaKnown RBP15.26■□□□□ 0.03
MRPL55-232ENST00000495434 PCDHA7Q9UN72 937 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 DERAQ9Y315 318 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 NUB1Q9Y5A7 615 aa15.26■□□□□ 0.03
MRPL55-232ENST00000495434 GCNT3O95395 438 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 POU2F2P09086 479 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
MRPL55-232ENST00000495434 SPATA31D3P0C874 917 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 COL9A1P20849 921 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 ME1P48163 572 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 ZXDAP98168 799 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 MRPL58Q14197 206 aaKnown RBP15.25■□□□□ 0.03
MRPL55-232ENST00000495434 PTPN21Q16825 1174 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 ZBTB41Q5SVQ8 909 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 ADALQ6DHV7 355 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 SLC8B1Q6J4K2 584 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 SPATA31D4Q6ZUB0 917 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 SMG7Q92540 1137 aaKnown RBP15.25■□□□□ 0.03
MRPL55-232ENST00000495434 STAMQ92783 540 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 ZNF707Q96C28 371 aaPredicted RBP15.25■□□□□ 0.03
MRPL55-232ENST00000495434 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
MRPL55-232ENST00000495434 PYM1Q9BRP8 204 aaKnown RBP15.25■□□□□ 0.03
MRPL55-232ENST00000495434 TRIM9Q9C026 710 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 FAM13BQ9NYF5 915 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 TUBGCP4Q9UGJ1 667 aa15.25■□□□□ 0.03
MRPL55-232ENST00000495434 FAM86C2PA6NEL3 165 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 H7C4K7 107 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 ADAM12O43184 909 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 TBC1D4O60343 1298 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 RFPL2O75678 378 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 ADSSP30520 456 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 MCM4P33991 863 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 OR1D2P34982 312 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 AARSP49588 968 aaKnown RBP eCLIP15.24■□□□□ 0.03
MRPL55-232ENST00000495434 DNM1Q05193 864 aaKnown RBP15.24■□□□□ 0.03
MRPL55-232ENST00000495434 FOXD4L6Q3SYB3 417 aaPredicted RBP15.24■□□□□ 0.03
MRPL55-232ENST00000495434 VARS2Q5ST30 1063 aaKnown RBP15.24■□□□□ 0.03
MRPL55-232ENST00000495434 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 SPATA1Q5VX52 437 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 FOXD4L3Q6VB84 417 aaPredicted RBP15.24■□□□□ 0.03
MRPL55-232ENST00000495434 STXBP4Q6ZWJ1 553 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 BMP8AQ7Z5Y6 402 aa15.24■□□□□ 0.03
MRPL55-232ENST00000495434 APPL2Q8NEU8 664 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms