RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 KIAA0753Q2KHM9 967 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 ERCC6LQ2NKX8 1250 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 ZNF484Q5JVG2 852 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 ALKBH5Q6P6C2 394 aaKnown RBP17.53■□□□□ 0.4
CBX4-204ENST00000495122 ZBTB8OSQ8IWT0 167 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 RDH13Q8NBN7 331 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 ASAP3Q8TDY4 903 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 LMBR1Q8WVP7 490 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 PSPC1Q8WXF1 523 aaKnown RBP17.53■□□□□ 0.4
CBX4-204ENST00000495122 TSC1Q92574 1164 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 TMEM117Q9H0C3 514 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 PRDM12Q9H4Q4 367 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 ADAMTS1Q9UHI8 967 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 TELO2Q9Y4R8 837 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 PCDHGC5Q9Y5F6 944 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 PCDHA11Q9Y5I1 949 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 EVPLQ92817 2033 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
CBX4-204ENST00000495122 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.4
CBX4-204ENST00000495122 LRRIQ4A6NIV6 560 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 TISP43B9A030 160 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 H2AFXP16104 143 aaPredicted RBP17.52■□□□□ 0.4
CBX4-204ENST00000495122 ATP2A2P16615 1042 aaKnown RBP17.52■□□□□ 0.4
CBX4-204ENST00000495122 APBA1Q02410 837 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 ZNF572Q7Z3I7 529 aaPredicted RBP17.52■□□□□ 0.4
CBX4-204ENST00000495122 CBWD2Q8IUF1 395 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 C7orf31Q8N865 590 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 USP38Q8NB14 1042 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 FBXL13Q8NEE6 735 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 SYT11Q9BT88 431 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 KIFC3Q9BVG8 833 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 ERAP1Q9NZ08 941 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 SNX12Q9UMY4 172 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 HYOU1Q9Y4L1 999 aa17.52■□□□□ 0.4
CBX4-204ENST00000495122 KIAA1671Q9BY89 1806 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 SPTBN5Q9NRC6 3674 aaKnown RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 CES2O00748 559 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 PPFIA4O75335 1185 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 H2AFZP0C0S5 128 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 GCLMP48507 274 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 DLG4P78352 724 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 ARID5AQ03989 594 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 GPNMBQ14956 572 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 PLCB4Q15147 1175 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 SURF1Q15526 300 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 TRIM71Q2Q1W2 868 aaKnown RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 PHLDB3Q6NSJ2 640 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 H2AFVQ71UI9 128 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 LRRC8DQ7L1W4 858 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 TRMT1LQ7Z2T5 733 aaKnown RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 SLC30A5Q8TAD4 765 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 PLEKHO2Q8TD55 490 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 RUBCNQ92622 972 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 NT5C1BQ96P26 610 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 GAS2L1Q99501 681 aaPredicted RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 C16orf70Q9BSU1 422 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 NFKBIZQ9BYH8 718 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 GPR88Q9GZN0 384 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 SLC28A3Q9HAS3 691 aa17.51■□□□□ 0.39
CBX4-204ENST00000495122 AGO2Q9UKV8 859 aaKnown RBP17.51■□□□□ 0.39
CBX4-204ENST00000495122 A0A0B4J269 797 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 MAGEB2O15479 319 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 ATP8B1O43520 1251 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 BAIAP3O94812 1187 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 ATP1A1P05023 1023 aaKnown RBP17.5■□□□□ 0.39
CBX4-204ENST00000495122 CKBP12277 381 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 MYOGP15173 224 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 SELPP16109 830 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 MCM3P25205 808 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
CBX4-204ENST00000495122 POU5F1Q01860 360 aaKnown RBP17.5■□□□□ 0.39
CBX4-204ENST00000495122 GCNT1Q02742 428 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 PTK7Q13308 1070 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 CAPSQ13938 189 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 HIC1Q14526 733 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 C15orf39Q6ZRI6 1047 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 WNT8BQ93098 351 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 SAAL1Q96ER3 474 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 MRPL4Q9BYD3 311 aaKnown RBP17.5■□□□□ 0.39
CBX4-204ENST00000495122 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
CBX4-204ENST00000495122 AJAP1Q9UKB5 411 aaPredicted RBP17.5■□□□□ 0.39
CBX4-204ENST00000495122 CAPN6Q9Y6Q1 641 aa17.5■□□□□ 0.39
CBX4-204ENST00000495122 NCANO14594 1321 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 MOCS3O95396 460 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 LGALS2P05162 132 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 TMEM253P0C7T8 217 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 HOXC8P31273 242 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 ADGRE1Q14246 886 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 TCEAL1Q15170 157 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 PPP2R2DQ66LE6 453 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 SYCE1Q8N0S2 351 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 SHC3Q92529 594 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 FNBP1Q96RU3 617 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 CCDC113Q9H0I3 377 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms