RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 DMXL1Q9Y485 3027 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 TICRRQ7Z2Z1 1910 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 PHLPP2Q6ZVD8 1323 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 SMIM28A0A1B0GU29 152 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 H7C4K7 107 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 TMEM189-UBE2V1I3L0A0 370 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 HIP1RO75146 1068 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 MYL4P12829 197 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 PTPN2P17706 415 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 RBM25P49756 843 aaKnown RBP10.55□□□□□ -0.72
UBR4-216ENST00000494503 SOX4Q06945 474 aaPredicted RBP10.55□□□□□ -0.72
UBR4-216ENST00000494503 RAD51AP2Q09MP3 1159 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 STRN3Q13033 797 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 ECM1Q16610 540 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 CYP4A22Q5TCH4 519 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 KRT79Q5XKE5 535 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 ZNF852Q6ZMS4 543 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 BICD1Q96G01 975 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 ACAP3Q96P50 834 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 TARS2Q9BW92 718 aaKnown RBP10.55□□□□□ -0.72
UBR4-216ENST00000494503 FOXP1Q9H334 677 aaPredicted RBP10.55□□□□□ -0.72
UBR4-216ENST00000494503 USP18Q9UMW8 372 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 DNM3Q9UQ16 869 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 BACE2Q9Y5Z0 518 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 F5P12259 2224 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 CACNA1AO00555 2505 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 FRYLO94915 3013 aa10.55□□□□□ -0.72
UBR4-216ENST00000494503 MED19A0JLT2 244 aaPredicted RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 WDR27A2RRH5 827 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 E9PMD0 336 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 SLC16A4O15374 487 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ECI2O75521 394 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 PAPLNO95428 1278 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 TARSP26639 723 aaKnown RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 GRM5P41594 1212 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 NPTX2P47972 431 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ADCY1Q08828 1119 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ST3GAL1Q11201 340 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ORC2Q13416 577 aaPredicted RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 PUM1Q14671 1186 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBR4-216ENST00000494503 PDCD11Q14690 1871 aaKnown RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 RSPO4Q2I0M5 234 aaPredicted RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 TANGO2Q6ICL3 276 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ZNF280DQ6N043 979 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ZNF461Q8TAF7 563 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 C18orf25Q96B23 403 aaPredicted RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 TCEAL4Q96EI5 215 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ZNF512Q96ME7 567 aaPredicted RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 PLA2G2FQ9BZM2 168 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 ZFP14Q9HCL3 533 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 GDE1Q9NZC3 331 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 FBXO4Q9UKT5 387 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 RAB23Q9ULC3 237 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 SMG5Q9UPR3 1016 aaKnown RBP10.54□□□□□ -0.72
UBR4-216ENST00000494503 INSL5Q9Y5Q6 135 aa10.54□□□□□ -0.72
UBR4-216ENST00000494503 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 SFI1A8K8P3 1242 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 PP2D1A8MPX8 630 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 ZNF197O14709 1029 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 SYN3O14994 580 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 SPTLC1O15269 473 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
UBR4-216ENST00000494503 GJA1P17302 382 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 MUTP22033 750 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 CDC25AP30304 524 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 GDI1P31150 447 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 MAGEA9P43362 315 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.724e-9■■■□□ 15.1
UBR4-216ENST00000494503 SPAG1Q07617 926 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 TWF1Q12792 350 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 PTGDRQ13258 359 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 LPAL2Q16609 132 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 FAM78AQ5JUQ0 283 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 MCTP1Q6DN14 999 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 MPZL3Q6UWV2 235 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 PRR23BQ6ZRT6 265 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 YAF2Q8IY57 180 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 MAML2Q8IZL2 1156 aaPredicted RBP10.53□□□□□ -0.72
UBR4-216ENST00000494503 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 NELL2Q99435 816 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 PLIN2Q99541 437 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 RUSC1Q9BVN2 902 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 TRMT61BQ9BVS5 477 aaKnown RBP10.53□□□□□ -0.72
UBR4-216ENST00000494503 ASAH2Q9NR71 780 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 ZSCAN32Q9NX65 697 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 FBXL5Q9UKA1 691 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 GMEB2Q9UKD1 530 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 PCDHGA2Q9Y5H1 932 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 RALGAPA1Q6GYQ0 2036 aa10.53□□□□□ -0.72
UBR4-216ENST00000494503 SEC24AO95486 1093 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 POU2F2P09086 479 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 MCF2P10911 925 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms