RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 STK33Q9BYT3 514 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 C2CD2Q9Y426 696 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 IPPQ9Y573 584 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 DCDC2CA8MYV0 355 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 RECQL4O94761 1208 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 TUBB4AP04350 444 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 JAM2P57087 298 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 CDK17Q00537 523 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 NCOA4Q13772 614 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 TMEM132DQ14C87 1099 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 TRIM60Q495X7 471 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 LRRC8DQ7L1W4 858 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 ARHGEF19Q8IW93 802 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 SMG8Q8ND04 991 aaKnown RBP15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 KIF18AQ8NI77 898 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 PPP1R13BQ96KQ4 1090 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 APOL6Q9BWW8 343 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 IMPG2Q9BZV3 1241 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 UBE2TQ9NPD8 197 aaPredicted RBP15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 AJAP1Q9UKB5 411 aaPredicted RBP15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 PCDHB2Q9Y5E7 798 aa15.17■□□□□ 0.02
PDZRN3-210ENST00000492909 SOWAHDA6NJG2 315 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 AKAP5P24588 427 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 TRPC3Q13507 836 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 DRAP1Q14919 205 aaPredicted RBP15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 C1orf53Q5VUE5 145 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 FMNL3Q8IVF7 1028 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 PPM1KQ8N3J5 372 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 TOX2Q96NM4 488 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 PI4K2AQ9BTU6 479 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 AIPL1Q9NZN9 384 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 PARP2Q9UGN5 583 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 ATP11BQ9Y2G3 1177 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 DERAQ9Y315 318 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 ALPK3Q96L96 1907 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 F8VZ95 297 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 RBAK-RBAKDNI3L0D1 243 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 CCP110O43303 1012 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 RAB27AP51159 221 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 MFAP3P55082 362 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 MBTPS1Q14703 1052 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 ALKAL1Q6UXT8 129 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 FAM81BQ96LP2 452 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 CHP1Q99653 195 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 IFIH1Q9BYX4 1025 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 CNTN3Q9P232 1028 aa15.16■□□□□ 0.02
PDZRN3-210ENST00000492909 TNRC18O15417 2968 aaPredicted RBP15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 TANC1Q9C0D5 1861 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 CST3P01034 146 aaPredicted RBP15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 STAT1P42224 750 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 RGS19P49795 217 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 GCNT1Q02742 428 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 DSC3Q14574 896 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 ASIC2Q16515 512 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 ARHGAP44Q17R89 818 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 SGSM1Q2NKQ1 1148 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 ENOSF1Q7L5Y1 443 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 TSPAN18Q96SJ8 248 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 ARID3AQ99856 593 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 ADAM2Q99965 735 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
PDZRN3-210ENST00000492909 MGEA5O60502 916 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 CLSTN1O94985 981 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 ASS1P00966 412 aaKnown RBP15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 SERPING1P05155 500 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 SOX5P35711 763 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 NOP14P78316 857 aaKnown RBP15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 ARID5AQ03989 594 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 TLE2Q04725 743 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 XKR4Q5GH76 650 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 DPF3Q92784 378 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 TATDN2Q93075 761 aa15.14■□□□□ 0.01
PDZRN3-210ENST00000492909 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ZNF623O75123 536 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ITGB3P05106 788 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 KRT19P08727 400 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 CCDC172P0C7W6 258 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 SKIP12755 728 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ITGA4P13612 1032 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 KCNE1P15382 129 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 FERP16591 822 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 MYL6P60660 151 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 KLHL30Q0D2K2 578 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 FAAP100Q0VG06 881 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 MTF1Q14872 753 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 SPOPLQ6IQ16 392 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 RAD9BQ6WBX8 426 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 GPIHBP1Q8IV16 184 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 C7orf61Q8IZ16 206 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms