RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 RAP1GAPP47736 663 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 CAPSQ13938 189 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 NAB2Q15742 525 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 PSAPL1Q6NUJ1 521 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 ANKS3Q6ZW76 656 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 PDZD4Q76G19 769 aaPredicted RBP17.25■□□□□ 0.35
CDK11A-220ENST00000492390 MFSD6LQ8IWD5 586 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 ZNF461Q8TAF7 563 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 BRF1Q92994 677 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 TCEAL4Q96EI5 215 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 FAM20AQ96MK3 541 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 LXNQ9BS40 222 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
CDK11A-220ENST00000492390 C8orf33Q9H7E9 229 aaPredicted RBP17.25■□□□□ 0.35
CDK11A-220ENST00000492390 TRPV4Q9HBA0 871 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 RBM12Q9NTZ6 932 aaKnown RBP17.25■□□□□ 0.35
CDK11A-220ENST00000492390 PCDHGA5Q9Y5G8 931 aa17.25■□□□□ 0.35
CDK11A-220ENST00000492390 TICRRQ7Z2Z1 1910 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 TMEM189-UBE2V1I3L0A0 370 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 ARNTLO00327 626 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 LARGE1O95461 756 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 EPHA7Q15375 998 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 CCDC6Q16204 474 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 PLA2G2CQ5R387 149 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 CYP4A22Q5TCH4 519 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 LRSAM1Q6UWE0 723 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 CACNA2D4Q7Z3S7 1137 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 CSGALNACT1Q8TDX6 532 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 GAB3Q8WWW8 586 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 E2F7Q96AV8 911 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
CDK11A-220ENST00000492390 TMEM121BQ9BXQ6 578 aaPredicted RBP17.24■□□□□ 0.35
CDK11A-220ENST00000492390 PCDHA4Q9UN74 947 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 NID2Q14112 1375 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 ASPMQ8IZT6 3477 aa17.24■□□□□ 0.35
CDK11A-220ENST00000492390 SPEGQ15772 3267 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 CCDC163A0A0D9SF12 145 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 PRRG1O14668 218 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 ABLIM3O94929 683 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
CDK11A-220ENST00000492390 ARL2P36404 184 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 VIPR2P41587 438 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 CCR2P41597 374 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 EVCP57679 992 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 NTRK3Q16288 839 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 ME3Q16798 604 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 RNF43Q68DV7 783 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 SLC8B1Q6J4K2 584 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 Q6ZS52 159 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 SYNPOQ8N3V7 929 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 DDX27Q96GQ7 796 aaKnown RBP17.23■□□□□ 0.35
CDK11A-220ENST00000492390 ZSWIM3Q96MP5 696 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 ZSWIM4Q9H7M6 989 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 KCNMB3Q9NPA1 279 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 WASF3Q9UPY6 502 aa17.23■□□□□ 0.35
CDK11A-220ENST00000492390 SRRM3A6NNA2 597 aaPredicted RBP17.22■□□□□ 0.35
CDK11A-220ENST00000492390 ZBTB39O15060 712 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 TRAPPC3O43617 180 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 RPP40O75818 363 aaKnown RBP17.22■□□□□ 0.35
CDK11A-220ENST00000492390 B3GAT3O94766 335 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 ATF2P15336 505 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 NOVA1P51513 510 aaKnown RBP17.22■□□□□ 0.35
CDK11A-220ENST00000492390 ROR1Q01973 937 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 PRIMPOLQ96LW4 560 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 ADAM33Q9BZ11 813 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 VPS45Q9NRW7 570 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 RGL1Q9NZL6 768 aa17.22■□□□□ 0.35
CDK11A-220ENST00000492390 M0R2N6 131 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 CHADO15335 359 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 SLC37A4O43826 429 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 DGAT1O75907 488 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 RECQL4O94761 1208 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 IFNAR1P17181 557 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 GLRA2P23416 452 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 TKTP29401 623 aaKnown RBP17.21■□□□□ 0.35
CDK11A-220ENST00000492390 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.35
CDK11A-220ENST00000492390 ST3GAL1Q11201 340 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 FOXC1Q12948 553 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 WDR44Q5JSH3 913 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 IQCEQ6IPM2 695 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 RALGPS2Q86X27 583 aaPredicted RBP17.21■□□□□ 0.35
CDK11A-220ENST00000492390 BLIDQ8IZY5 108 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 ELMOD1Q8N336 334 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 LEMD2Q8NC56 503 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 SPRYD3Q8NCJ5 442 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
CDK11A-220ENST00000492390 COL26A1Q96A83 441 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
CDK11A-220ENST00000492390 GPR88Q9GZN0 384 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 PRMT7Q9NVM4 692 aaPredicted RBP17.21■□□□□ 0.35
CDK11A-220ENST00000492390 C2orf42Q9NWW7 574 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 SNTG2Q9NY99 539 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 SPAG17Q6Q759 2223 aa17.21■□□□□ 0.35
CDK11A-220ENST00000492390 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
CDK11A-220ENST00000492390 HEPACAM2A8MVW5 462 aa17.2■□□□□ 0.34
CDK11A-220ENST00000492390 AKAP3O75969 853 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms