RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NCBP1Q09161 790 aaKnown RBP15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 UAP1L1Q3KQV9 507 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 RALGPS2Q86X27 583 aaPredicted RBP15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 YAF2Q8IY57 180 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 ADAM32Q8TC27 787 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 CEP170P1Q96L14 293 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 TRPV4Q9HBA0 871 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 GTSE1Q9NYZ3 720 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 PATE3B3GLJ2 98 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 CHADO15335 359 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 ASAP2O43150 1006 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 SEC24AO95486 1093 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 CHMLP26374 656 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 TKTP29401 623 aaKnown RBP15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 ELF1P32519 619 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 ROR1Q01973 937 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 MBTD1Q05BQ5 628 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 EMC2Q15006 297 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 PCBP1Q15365 356 aaKnown RBP eCLIP15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 NAB2Q15742 525 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 PFKFB3Q16875 520 aaPredicted RBP15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 CYP4A22Q5TCH4 519 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 SYNPOQ8N3V7 929 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 ZFYVE19Q96K21 471 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 WRAP73Q9P2S5 460 aaPredicted RBP15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 SLC8A2Q9UPR5 921 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 BACE2Q9Y5Z0 518 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 ZMYM2Q9UBW7 1377 aa15.19■□□□□ 0.02
EXOSC3-207ENST00000490516 CACNA1EQ15878 2313 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 NAV2Q8IVL1 2488 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 SPAARA0A1B0GVQ0 90 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 EIF4E1BA6NMX2 242 aaKnown RBP15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 I3L4J1 428 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 EML1O00423 815 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 SEC24BO95487 1268 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 MYL4P12829 197 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 GSPT1P15170 499 aaKnown RBP15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 CDC27P30260 824 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 RFC5P40937 340 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 TEAD2Q15562 447 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 ELF2Q15723 593 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 SLC27A1Q6PCB7 646 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 ZNF461Q8TAF7 563 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 TCP11Q8WWU5 503 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 INSL5Q9Y5Q6 135 aa15.18■□□□□ 0.02
EXOSC3-207ENST00000490516 NUP210Q8TEM1 1887 aaPredicted RBP15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 KHNYNO15037 678 aaKnown RBP15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 SGSM2O43147 1006 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 RHOBTB1O94844 696 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 ABLIM3O94929 683 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 THP07101 528 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 ARPP19P56211 112 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 FCHO2Q0JRZ9 810 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 EXOC8Q8IYI6 725 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 LRRC3BQ96PB8 259 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 HHIPQ96QV1 700 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 MKNK1Q9BUB5 465 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 CEP72Q9P209 647 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 CELSR3Q9NYQ7 3312 aa15.17■□□□□ 0.02
EXOSC3-207ENST00000490516 GOLGA8AA7E2F4 631 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 GOLGA8BA8MQT2 603 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 ZBTB43O43298 467 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 PRKCBP05771 671 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 ATF2P15336 505 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 QARSP47897 775 aaKnown RBP15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 USP11P51784 963 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 CD300LGQ6UXG3 332 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 ANKS3Q6ZW76 656 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 TCEAL8Q8IYN2 117 aa15.16■□□□□ 0.02
EXOSC3-207ENST00000490516 A0A1B0GUA9 196 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 ZBTB39O15060 712 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 B3GAT3O94766 335 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 TDP2O95551 362 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 GNA11P29992 359 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 BRCC3P46736 316 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 IRX4P78413 519 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 SIM1P81133 766 aaPredicted RBP15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 TNK2Q07912 1038 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 CAPSQ13938 189 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 Q4G0T1 1027 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 IQCEQ6IPM2 695 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 SLC8B1Q6J4K2 584 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 CHCHD4Q8N4Q1 142 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 SHKBP1Q8TBC3 707 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 HNRNPLLQ8WVV9 542 aaKnown RBP15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 E2F7Q96AV8 911 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 ZNF512Q96ME7 567 aaPredicted RBP15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 MTRQ99707 1265 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 XPNPEP1Q9NQW7 623 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 INVSQ9Y283 1065 aa15.15■□□□□ 0.02
EXOSC3-207ENST00000490516 ADAMTS9Q9P2N4 1935 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms