RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 PALB2Q86YC2 1186 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 CCDC65Q8IXS2 484 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 PLCD3Q8N3E9 789 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 C3orf58Q8NDZ4 430 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 FOXD4L4Q8WXT5 416 aaPredicted RBP20.69■□□□□ 0.9
MRPL55-230ENST00000489430 ASB7Q9H672 318 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 PANK4Q9NVE7 773 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 FAM13BQ9NYF5 915 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 MTRRQ9UBK8 725 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 DERAQ9Y315 318 aa20.69■□□□□ 0.9
MRPL55-230ENST00000489430 IDEP14735 1019 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 ME1P48163 572 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 L1TD1Q5T7N2 865 aaKnown RBP20.68■□□□□ 0.9
MRPL55-230ENST00000489430 ADALQ6DHV7 355 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 STXBP4Q6ZWJ1 553 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 ZDHHC14Q8IZN3 488 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 KREMEN2Q8NCW0 462 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 C18orf25Q96B23 403 aaPredicted RBP20.68■□□□□ 0.9
MRPL55-230ENST00000489430 ACCSQ96QU6 501 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 MUTYHQ9UIF7 546 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 FBXW11Q9UKB1 542 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 AGO2Q9UKV8 859 aaKnown RBP20.68■□□□□ 0.9
MRPL55-230ENST00000489430 PCDHA7Q9UN72 937 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 NUB1Q9Y5A7 615 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 ATP6V1DQ9Y5K8 247 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 MYH11P35749 1972 aa20.68■□□□□ 0.9
MRPL55-230ENST00000489430 CCDC195A0A1B0GUA6 201 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 PRR33A8MZF0 331 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 HOXA9P31269 272 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 TNFSF9P41273 254 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 DNM1Q05193 864 aaKnown RBP20.67■□□□□ 0.9
MRPL55-230ENST00000489430 CCDC149Q6ZUS6 474 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 SPRYD3Q8NCJ5 442 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 EDAQ92838 391 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 KIF12Q96FN5 646 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 SUSD3Q96L08 255 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 TRIM9Q9C026 710 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 TMEM206Q9H813 350 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 C11orf16Q9NQ32 467 aa20.67■□□□□ 0.9
MRPL55-230ENST00000489430 LACTBL1A8MY62 500 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 ANKRD63C9JTQ0 380 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 H7C4K7 107 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 ZMYND10O75800 440 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 GCNT3O95395 438 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 POU2F2P09086 479 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 HNRNPA1P09651 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
MRPL55-230ENST00000489430 RPL17P18621 184 aaKnown RBP20.66■□□□□ 0.9
MRPL55-230ENST00000489430 UVSSAQ2YD98 709 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 RESP18Q5W5W9 173 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 SLC8B1Q6J4K2 584 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 OTOP3Q7RTS5 596 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 TDRD5Q8NAT2 981 aaKnown RBP20.66■□□□□ 0.9
MRPL55-230ENST00000489430 APPL2Q8NEU8 664 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 STAMQ92783 540 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 DHX58Q96C10 678 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 ACSF2Q96CM8 615 aaPredicted RBP20.66■□□□□ 0.9
MRPL55-230ENST00000489430 C7orf25Q9BPX7 421 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 LRFN3Q9BTN0 628 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 OXCT2Q9BYC2 517 aaPredicted RBP20.66■□□□□ 0.9
MRPL55-230ENST00000489430 PRKD2Q9BZL6 878 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 WDR6Q9NNW5 1121 aaKnown RBP20.66■□□□□ 0.9
MRPL55-230ENST00000489430 C2CD2Q9Y426 696 aa20.66■□□□□ 0.9
MRPL55-230ENST00000489430 WEE2P0C1S8 567 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 GARTP22102 1010 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 IGFBP6P24592 240 aaPredicted RBP20.65■□□□□ 0.9
MRPL55-230ENST00000489430 TKTP29401 623 aaKnown RBP20.65■□□□□ 0.9
MRPL55-230ENST00000489430 ADSSP30520 456 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 BRCC3P46736 316 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 MRPL58Q14197 206 aaKnown RBP20.65■□□□□ 0.9
MRPL55-230ENST00000489430 BECN1Q14457 450 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
MRPL55-230ENST00000489430 ZBTB41Q5SVQ8 909 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 LIN9Q5TKA1 542 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 SPATA1Q5VX52 437 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 KANK3Q6NY19 840 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
MRPL55-230ENST00000489430 NT5DC4Q86YG4 428 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 POMGNT1Q8WZA1 660 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 TSHZ2Q9NRE2 1034 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 TUBGCP4Q9UGJ1 667 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 CDH22Q9UJ99 828 aa20.65■□□□□ 0.9
MRPL55-230ENST00000489430 KIAA0391O15091 583 aaKnown RBP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 POLR2DO15514 142 aaKnown RBP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 TBC1D4O60343 1298 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 LDHAP00338 332 aaKnown RBP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 MCM4P33991 863 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 OR1D2P34982 312 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 AARSP49588 968 aaKnown RBP eCLIP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 KRT85P78386 507 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 PTPN21Q16825 1174 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 VARS2Q5ST30 1063 aaKnown RBP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 GLYCTKQ8IVS8 523 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 BEST2Q8NFU1 509 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 SMG7Q92540 1137 aaKnown RBP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 ZNF707Q96C28 371 aaPredicted RBP20.64■□□□□ 0.89
MRPL55-230ENST00000489430 MAFFQ9ULX9 164 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 PCDHB8Q9UN66 801 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 CDY1Q9Y6F8 540 aa20.64■□□□□ 0.89
MRPL55-230ENST00000489430 C2CD4DB7Z1M9 353 aa20.63■□□□□ 0.89
MRPL55-230ENST00000489430 M0QZQ0 153 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms