RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 LIN9Q5TKA1 542 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 CATSPERGQ6ZRH7 1159 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 VCPIP1Q96JH7 1222 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 WRNIP1Q96S55 665 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 ROPN1BQ9BZX4 212 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 PORCNQ9H237 461 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 SEMA4AQ9H3S1 761 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 ROPN1Q9HAT0 212 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 LRRC4CQ9HCJ2 640 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 MAFBQ9Y5Q3 323 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 TNNI1P19237 187 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 ITIH2P19823 946 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 ACO1P21399 889 aaKnown RBP15.17■□□□□ 0.02
ABCB1-207ENST00000488737 PIK3CAP42336 1068 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 HMGCS2P54868 508 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 CAV1Q03135 178 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 PTK6Q13882 451 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 ZNF568Q3ZCX4 644 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 TNFAIP8L3Q5GJ75 292 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 TDRD10Q5VZ19 366 aaKnown RBP15.17■□□□□ 0.02
ABCB1-207ENST00000488737 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
ABCB1-207ENST00000488737 XPO6Q96QU8 1125 aaKnown RBP15.17■□□□□ 0.02
ABCB1-207ENST00000488737 DHX33Q9H6R0 707 aaKnown RBP15.17■□□□□ 0.02
ABCB1-207ENST00000488737 NFKBIEO00221 500 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 PSTPIP1O43586 416 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 PROSCO94903 275 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 OATP04181 439 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 RRM1P23921 792 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 TBXAS1P24557 533 aaPredicted RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 KRT17Q04695 432 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 APOBEC3FQ8IUX4 373 aaKnown RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 ZKSCAN4Q969J2 545 aaPredicted RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 DDX27Q96GQ7 796 aaKnown RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 CEP89Q96ST8 783 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 ZNF302Q9NR11 478 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 CNTN6Q9UQ52 1028 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 WDR90Q96KV7 1748 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 VNN1O95497 513 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 ARL2P36404 184 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 KCNJ1P48048 391 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 NLRP11P59045 1033 aaKnown RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 CUL2Q13617 745 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 STXBP2Q15833 593 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 SMYD5Q6GMV2 418 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 RHBDF2Q6PJF5 856 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 PHF13Q86YI8 300 aaPredicted RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 DEPTORQ8TB45 409 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 SNF8Q96H20 258 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 CGRRF1Q99675 332 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 NIFKQ9BYG3 293 aaKnown RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 AZI2Q9H6S1 392 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 MRPL47Q9HD33 250 aaKnown RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 HOXC10Q9NYD6 342 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 DDX20Q9UHI6 824 aaKnown RBP15.16■□□□□ 0.02
ABCB1-207ENST00000488737 TELO2Q9Y4R8 837 aa15.16■□□□□ 0.02
ABCB1-207ENST00000488737 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 GAS8O95995 478 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 GLRA2P23416 452 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 RFC5P40937 340 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 SP4Q02446 784 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 CRELD2Q6UXH1 353 aaPredicted RBP15.15■□□□□ 0.02
ABCB1-207ENST00000488737 ABRAQ8N0Z2 381 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 CHST13Q8NET6 341 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.15■□□□□ 0.02
ABCB1-207ENST00000488737 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 CPA5Q8WXQ8 436 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 P3H4Q92791 437 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 CHMP6Q96FZ7 201 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 DCLK3Q9C098 648 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 CCDC134Q9H6E4 229 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 TMEM134Q9H6X4 195 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 RBAKQ9NYW8 714 aaPredicted RBP15.15■□□□□ 0.02
ABCB1-207ENST00000488737 SCINQ9Y6U3 715 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 SBF1O95248 1867 aa15.15■□□□□ 0.02
ABCB1-207ENST00000488737 IGKV6D-21A0A0A0MT36 114 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 K7ERI5 159 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 RASGRF2O14827 1237 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 CLTAP09496 248 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 ATP4AP20648 1035 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 DRD4P21917 467 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 FGFR4P22455 802 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 NOMO3P69849 1222 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 IFT88Q13099 833 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 NOL9Q5SY16 702 aaKnown RBP15.14■□□□□ 0.01
ABCB1-207ENST00000488737 GKAP1Q5VSY0 366 aaPredicted RBP15.14■□□□□ 0.01
ABCB1-207ENST00000488737 TAOK1Q7L7X3 1001 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 RHOT1Q8IXI2 618 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 CACNA2D3Q8IZS8 1091 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 CNPY4Q8N129 248 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 ATL2Q8NHH9 583 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 C1orf54Q8WWF1 131 aa15.14■□□□□ 0.01
ABCB1-207ENST00000488737 ELMO3Q96BJ8 720 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms