RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 BLZF1Q9H2G9 400 aa24.37■■□□□ 1.49
CDHR3-212ENST00000487084 ADAM7Q9H2U9 754 aa24.37■■□□□ 1.49
CDHR3-212ENST00000487084 SFXN1Q9H9B4 322 aa24.37■■□□□ 1.49
CDHR3-212ENST00000487084 CPSF3Q9UKF6 684 aaKnown RBP24.37■■□□□ 1.49
CDHR3-212ENST00000487084 AGO2Q9UKV8 859 aaKnown RBP24.37■■□□□ 1.49
CDHR3-212ENST00000487084 NUB1Q9Y5A7 615 aa24.37■■□□□ 1.49
CDHR3-212ENST00000487084 MUC3AQ02505 3323 aa24.37■■□□□ 1.49
CDHR3-212ENST00000487084 PRPF6O94906 941 aaKnown RBP24.36■■□□□ 1.49
CDHR3-212ENST00000487084 SPATA31D3P0C874 917 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 CASP1P29466 404 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 RPL9P32969 192 aaKnown RBP24.36■■□□□ 1.49
CDHR3-212ENST00000487084 CD300LGQ6UXG3 332 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 TMC5Q6UXY8 1006 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 SPATA31D4Q6ZUB0 917 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 GPR65Q8IYL9 337 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 TMEM130Q8N3G9 435 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 PIK3R5Q8WYR1 880 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 C7orf25Q9BPX7 421 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 FNIP2Q9P278 1114 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 UBQLN1Q9UMX0 589 aaKnown RBP24.36■■□□□ 1.49
CDHR3-212ENST00000487084 STYXL1Q9Y6J8 313 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 BDP1A6H8Y1 2624 aa24.36■■□□□ 1.49
CDHR3-212ENST00000487084 A0A1B0GVL5 298 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 C19orf67A6NJJ6 358 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 PFKFB1P16118 471 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 SP100P23497 879 aaPredicted RBP24.35■■□□□ 1.49
CDHR3-212ENST00000487084 TKTP29401 623 aaKnown RBP24.35■■□□□ 1.49
CDHR3-212ENST00000487084 POSTNQ15063 836 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 ELMSAN1Q6PJG2 1045 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 STXBP4Q6ZWJ1 553 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 GRAMD1CQ8IYS0 662 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 LNX1Q8TBB1 728 aaPredicted RBP24.35■■□□□ 1.49
CDHR3-212ENST00000487084 RIPOR3Q96MK2 946 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 SCAND2PQ9GZW5 306 aaPredicted RBP24.35■■□□□ 1.49
CDHR3-212ENST00000487084 SERTAD1Q9UHV2 236 aa24.35■■□□□ 1.49
CDHR3-212ENST00000487084 TGM5O43548 720 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 XPOTO43592 962 aaKnown RBP24.34■■□□□ 1.49
CDHR3-212ENST00000487084 FGFR3P22607 806 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 CMA1P23946 247 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 ADSSP30520 456 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 MCM4P33991 863 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 GUCY2FP51841 1108 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 JADE1Q6IE81 842 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 PDXDC1Q6P996 788 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 GLIS3Q8NEA6 775 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 NOC3LQ8WTT2 800 aaKnown RBP24.34■■□□□ 1.49
CDHR3-212ENST00000487084 KHSRPQ92945 711 aaKnown RBP eCLIP24.34■■□□□ 1.49
CDHR3-212ENST00000487084 TMEM206Q9H813 350 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 GDPD2Q9HCC8 539 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 TSHZ2Q9NRE2 1034 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 DPP7Q9UHL4 492 aa24.34■■□□□ 1.49
CDHR3-212ENST00000487084 MTHFRP42898 656 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 FAM26FQ5R3K3 315 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 ATAT1Q5SQI0 421 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 CNNM4Q6P4Q7 775 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 CD302Q8IX05 232 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 FEZF2Q8TBJ5 459 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 SAAL1Q96ER3 474 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 NECTIN4Q96NY8 510 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 CLSTN3Q9BQT9 956 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 POMKQ9H5K3 350 aa24.33■■□□□ 1.49
CDHR3-212ENST00000487084 NFICP08651 508 aa24.32■■□□□ 1.48
CDHR3-212ENST00000487084 SLFN14P0C7P3 912 aa24.32■■□□□ 1.48
CDHR3-212ENST00000487084 CUL4BQ13620 913 aa24.32■■□□□ 1.48
CDHR3-212ENST00000487084 UNC13DQ70J99 1090 aa24.32■■□□□ 1.48
CDHR3-212ENST00000487084 BEST2Q8NFU1 509 aa24.32■■□□□ 1.48
CDHR3-212ENST00000487084 FAM213AQ9BRX8 229 aa24.32■■□□□ 1.48
CDHR3-212ENST00000487084 ACTN4O43707 911 aaKnown RBP24.31■■□□□ 1.48
CDHR3-212ENST00000487084 CYP3A5P20815 502 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 NUCB2P80303 420 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 TMEM132DQ14C87 1099 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 ZBTB6Q15916 424 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 ARMCX5Q6P1M9 558 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 ANKS3Q6ZW76 656 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 TSPAN18Q96SJ8 248 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 CBWD1Q9BRT8 395 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 PCIF1Q9H4Z3 704 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 EPHX3Q9H6B9 360 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 MTRRQ9UBK8 725 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.31■■□□□ 1.48
CDHR3-212ENST00000487084 C5orf42Q9H799 3197 aa24.31■■□□□ 1.48
CDHR3-212ENST00000487084 PLXNA3P51805 1871 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 LOC730098B7Z3J9 87 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 ADAM12O43184 909 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 RFPL2O75678 378 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 ADRB2P07550 413 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 GARTP22102 1010 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 LRPAP1P30533 357 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 OR1D2P34982 312 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 SYKP43405 635 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 GPR149Q86SP6 731 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 KREMEN2Q8NCW0 462 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 ZSWIM2Q8NEG5 633 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 PLEKHA4Q9H4M7 779 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 CDY1Q9Y6F8 540 aa24.3■■□□□ 1.48
CDHR3-212ENST00000487084 PDCD11Q14690 1871 aaKnown RBP24.3■■□□□ 1.48
CDHR3-212ENST00000487084 VWA8A3KMH1 1905 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 CCDC195A0A1B0GUA6 201 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 GOLGA8IPA6NC78 632 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 GOLGA8JA6NMD2 632 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms