RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PCDHGA6Q9Y5G7 932 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCDHGA3Q9Y5H0 932 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCDHGA2Q9Y5H1 932 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 FPGT-TNNI3KV9GXZ4 949 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PBRM1Q86U86 1689 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PIPSLA2A3N6 862 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 KIF3BO15066 747 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 EIF4G3O43432 1585 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 SPDEFO95238 335 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 ITGAMP11215 1152 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 CCND1P24385 295 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 CD38P28907 300 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 CXCR5P32302 372 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 MTNR1BP49286 362 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 CHN2P52757 468 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 SEC24CP53992 1094 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 RAP2BP61225 183 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 UGT8Q16880 541 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 ATXN7L2Q5T6C5 722 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 FAM102AQ5T9C2 384 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 CXorf57Q6NSI4 855 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 KCNK18Q7Z418 384 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 MYO1HQ8N1T3 1032 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 REPS2Q8NFH8 660 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 SLC35B2Q8TB61 432 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 JPH3Q8WXH2 748 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 EAF2Q96CJ1 260 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 CCDC136Q96JN2 1154 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 ANKRD6Q9Y2G4 727 aa5.27□□□□□ -1.57
CDC42BPA-212ENST00000478573 TARBP1Q13395 1621 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 BIVM-ERCC5R4GMW8 1640 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 CHD1O14646 1710 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 KLHL33A6NCF5 533 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 AKR1B10O60218 316 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 GASTP01350 101 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 U2AF1L5P0DN76 240 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 MTHFD2P13995 350 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 ZNF37AP17032 561 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 AGXTP21549 392 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 ADSLP30566 484 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 PTH2RP49190 550 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 TBX4P57082 545 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 C21orf58P58505 322 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 MRPS9P82933 396 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 CDK17Q00537 523 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 U2AF1Q01081 240 aaKnown RBP eCLIP5.26□□□□□ -1.574e-7■■■■□ 24.2
CDC42BPA-212ENST00000478573 FOXI1Q12951 378 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 ABHD17BQ5VST6 288 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 PNMA8AQ86V59 439 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 MAGEB6Q8N7X4 407 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 NTN5Q8WTR8 489 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 RAX2Q96IS3 184 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 COQ10AQ96MF6 247 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 NEU1Q99519 415 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 R3HDMLQ9H3Y0 253 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 DKK2Q9UBU2 259 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 TESQ9UGI8 421 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 IP6K2Q9UHH9 426 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 DPP7Q9UHL4 492 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 TOPBP1Q92547 1522 aa5.26□□□□□ -1.57
CDC42BPA-212ENST00000478573 RPTORQ8N122 1335 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 KAT6AQ92794 2004 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 DRGXA6NNA5 263 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 CDKL5O76039 1030 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 TYRP1P17643 537 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 VCAM1P19320 739 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 CRHR1P34998 444 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 FLT3LGP49771 235 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 CLRN1P58418 232 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 HLTFQ14527 1009 aaKnown RBP eCLIP5.25□□□□□ -1.572e-6■■□□□ 13.6
CDC42BPA-212ENST00000478573 ODF1Q14990 250 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.25□□□□□ -1.571e-6■□□□□ 8.8
CDC42BPA-212ENST00000478573 EFCAB2Q5VUJ9 269 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 FBXO42Q6P3S6 717 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 WDR75Q8IWA0 830 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 OR56A1Q8NGH5 318 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 TTC8Q8TAM2 541 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 TGFBRAP1Q8WUH2 860 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 PAWRQ96IZ0 340 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 TEKT5Q96M29 485 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 UHRF1Q96T88 793 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 DNAJC28Q9NX36 388 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 INSL6Q9Y581 213 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 GPR45Q9Y5Y3 372 aa5.25□□□□□ -1.57
CDC42BPA-212ENST00000478573 CXorf49A8MYA2 514 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 XPOTO43592 962 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 PRC1O43663 620 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 PHF2O75151 1096 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 ZRANB2O95218 330 aaKnown RBP eCLIP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 FOSP01100 380 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 SNRPA1P09661 255 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 SRSF2Q01130 221 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 MPP3Q13368 585 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 MST1LQ2TV78 715 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 SPDYE7PQ495Y7 208 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 ZKSCAN2Q63HK3 967 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 TSHZ3Q63HK5 1081 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 MED25Q71SY5 747 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms