RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 IWS1Q96ST2 819 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 STK33Q9BYT3 514 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 LRRC19Q9H756 370 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 SUDS3Q9H7L9 328 aaPredicted RBP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 DDX18Q9NVP1 670 aaKnown RBP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 ZBTB1Q9Y2K1 713 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 R3HDM2Q9Y2K5 976 aaKnown RBP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 LAMB1P07942 1786 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 MIF4GDA9UHW6 222 aaKnown RBP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 OPHN1O60890 802 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 MED24O75448 989 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 HAUS5O94927 633 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 BAG2O95816 211 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 ITIH2P19823 946 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 YY1P25490 414 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 HPCAP84074 193 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 NR1H3Q13133 447 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 SGO2Q562F6 1265 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 C11orf63Q6NUN7 778 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 ZNF276Q8N554 614 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 NSL1Q96IY1 281 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 SLC4A9Q96Q91 983 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 PANX3Q96QZ0 392 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 SPZ1Q9BXG8 430 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 MAK16Q9BXY0 300 aaKnown RBP10.44□□□□□ -0.74
COL13A1-207ENST00000478219 LRRC27Q9C0I9 530 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 ANAPC5Q9UJX4 755 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 ACTL7BQ9Y614 415 aa10.44□□□□□ -0.74
COL13A1-207ENST00000478219 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TAF1P21675 1872 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 NUP98P52948 1817 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 SFI1A8K8P3 1242 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TRIM49P0CI25 452 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TRIM49CP0CI26 452 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TSPY3P0CV98 308 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TSPY8P0CW00 308 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 ADCY8P40145 1251 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 CETN2P41208 172 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 SLC12A3P55017 1021 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 MTMR2Q13614 643 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 COG2Q14746 738 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 MDH1BQ5I0G3 518 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 PHLDB3Q6NSJ2 640 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 RNF111Q6ZNA4 994 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 LRRC6Q86X45 466 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 C12orf50Q8NA57 414 aaPredicted RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 SLC5A5Q92911 643 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 PCDHB18PQ96TA0 734 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 MKNK1Q9BUB5 465 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 RUSC1Q9BVN2 902 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 RAB34Q9BZG1 259 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 CRNKL1Q9BZJ0 848 aaKnown RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 KCNK13Q9HB14 408 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 MTUS1Q9ULD2 1270 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 GMEB1Q9Y692 573 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 EXOC1LA0A1B0GW35 172 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 BUD23O43709 281 aaKnown RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TYROBPO43914 113 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 RARBP10826 455 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 KRT15P19012 456 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 RPL13P26373 211 aaKnown RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 PGM1P36871 562 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 GALK1P51570 392 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 SFT2D3Q587I9 215 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 SMC6Q96SB8 1091 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 REEP2Q9BRK0 252 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 MKNK2Q9HBH9 465 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 DDX25Q9UHL0 483 aaKnown RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 PCDHA12Q9UN75 941 aa10.43□□□□□ -0.74
COL13A1-207ENST00000478219 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
COL13A1-207ENST00000478219 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 VILLO15195 856 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 PRPF4O43172 522 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SPOPO43791 374 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SUPT3HO75486 399 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 ZNF189O75820 626 aaPredicted RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 TMCC1O94876 653 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 GGPS1O95749 300 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 EIF4BP23588 611 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 CRABP2P29373 138 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SBK1Q52WX2 424 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SPDYAQ5MJ70 313 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 MEX3CQ5U5Q3 659 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 RHOT2Q8IXI1 618 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SMC1BQ8NDV3 1235 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 MIPOL1Q8TD10 442 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 TGFBRAP1Q8WUH2 860 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 PSPC1Q8WXF1 523 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 CLMNQ96JQ2 1002 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 FAM84BQ96KN1 310 aaPredicted RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 AGPAT1Q99943 283 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 LARSQ9P2J5 1176 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms