RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 TRAPPC3O43617 180 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 XYLBO75191 536 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 TOM1L1O75674 476 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 HOXA9P31269 272 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 TNFSF9P41273 254 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
C4A-250ENST00000469975 ROR1Q01973 937 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 ZBTB41Q5SVQ8 909 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 ARL6IP4Q66PJ3 421 aaKnown RBP18.39■□□□□ 0.53
C4A-250ENST00000469975 ANKS3Q6ZW76 656 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 GPBP1Q86WP2 473 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 TBC1D32Q96NH3 1257 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 TBC1D17Q9HA65 648 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 BLOC1S4Q9NUP1 217 aa18.39■□□□□ 0.53
C4A-250ENST00000469975 DMDP11532 3685 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 WDR27A2RRH5 827 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 SEC24AO95486 1093 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 SMTNP53814 917 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 NCKAP1LP55160 1127 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 GPC5P78333 572 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 MCM6Q14566 821 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 KARSQ15046 597 aaKnown RBP18.38■□□□□ 0.53
C4A-250ENST00000469975 SLC5A9Q2M3M2 681 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 PABPC1LQ4VXU2 614 aaKnown RBP18.38■□□□□ 0.53
C4A-250ENST00000469975 POTEHQ6S545 545 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 ASCL5Q7RTU5 278 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 CCDC105Q8IYK2 499 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 DTWD2Q8NBA8 298 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 NXPE3Q969Y0 559 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 BICD1Q96G01 975 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 KXD1Q9BQD3 176 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 IRF2BPLQ9H1B7 796 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
C4A-250ENST00000469975 NUB1Q9Y5A7 615 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 MIA3Q5JRA6 1907 aa18.38■□□□□ 0.53
C4A-250ENST00000469975 CLDN3O15551 220 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 TBC1D4O60343 1298 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 PLCG1P19174 1290 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 RFX1P22670 979 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 MCM4P33991 863 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 GUCY2FP51841 1108 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 MCL1Q07820 350 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 UVSSAQ2YD98 709 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 SPECC1Q5M775 1068 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 SLC8B1Q6J4K2 584 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 NPAS3Q8IXF0 933 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 ARHGEF3Q9NR81 526 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 FBXL5Q9UKA1 691 aa18.37■□□□□ 0.53
C4A-250ENST00000469975 NRG2O14511 850 aaPredicted RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 DCNP07585 359 aaKnown RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 RPL9P32969 192 aaKnown RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 UBA7P41226 1012 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 MCM2P49736 904 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 MRPL58Q14197 206 aaKnown RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 ANGPT1Q15389 498 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 SF3A1Q15459 793 aaKnown RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 MYCT1Q8N699 235 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 ZNF461Q8TAF7 563 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 MCRS1Q96EZ8 462 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 CALML4Q96GE6 196 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 RTP3Q9BQQ7 232 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 FOXQ1Q9C009 403 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 SLC2A4RGQ9NR83 387 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 KCND2Q9NZV8 630 aa18.36■□□□□ 0.53
C4A-250ENST00000469975 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 ZFP37Q9Y6Q3 630 aaPredicted RBP18.36■□□□□ 0.53
C4A-250ENST00000469975 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
C4A-250ENST00000469975 K7ENM7 598 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 PRRG1O14668 218 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 LRRN2O75325 713 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 ABLIM3O94929 683 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 RHOP08100 348 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 POU2F2P09086 479 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 CEBPBP17676 345 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 NBL1P41271 181 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 CTXN3Q4LDR2 81 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 RAD54LQ92698 747 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 DDX12PQ92771 950 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 KIF12Q96FN5 646 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 SUSD3Q96L08 255 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 AK8Q96MA6 479 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 ZHX3Q9H4I2 956 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 CYP4F11Q9HBI6 524 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 LARSQ9P2J5 1176 aaKnown RBP18.35■□□□□ 0.53
C4A-250ENST00000469975 DAXXQ9UER7 740 aaPredicted RBP18.35■□□□□ 0.53
C4A-250ENST00000469975 TBX20Q9UMR3 447 aa18.35■□□□□ 0.53
C4A-250ENST00000469975 MRPS23Q9Y3D9 190 aaKnown RBP18.35■□□□□ 0.53
C4A-250ENST00000469975 TIMM13Q9Y5L4 95 aaPredicted RBP18.35■□□□□ 0.53
C4A-250ENST00000469975 TTC26A0AVF1 554 aa18.34■□□□□ 0.53
C4A-250ENST00000469975 ARHGEF37A1IGU5 675 aa18.34■□□□□ 0.53
C4A-250ENST00000469975 LACTBL1A8MY62 500 aa18.34■□□□□ 0.53
C4A-250ENST00000469975 PROB1E7EW31 1015 aa18.34■□□□□ 0.53
C4A-250ENST00000469975 PPEF2O14830 753 aa18.34■□□□□ 0.53
C4A-250ENST00000469975 SYN3O14994 580 aa18.34■□□□□ 0.53
C4A-250ENST00000469975 FAM13AO94988 1023 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms