RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 POLR2DO15514 142 aaKnown RBP7.6□□□□□ -1.19
CLDN4-204ENST00000466411 NARSO43776 548 aaKnown RBP7.6□□□□□ -1.19
CLDN4-204ENST00000466411 GPR32O75388 356 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 SMC2O95347 1197 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 MBD3O95983 291 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 CHRNA1P02708 482 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 VTNP04004 478 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 CTSHP09668 335 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PFKFB1P16118 471 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 CDC25AP30304 524 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PPP1R2P41236 205 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PTENP60484 403 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PSMD2Q13200 908 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 KIZQ2M2Z5 673 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 SHC4Q6S5L8 630 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 CATSPER4Q7RTX7 472 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 RETREG3Q86VR2 466 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 FSIP1Q8NA03 581 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PRR7Q8TB68 274 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 NLRP4Q96MN2 994 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 NECTIN4Q96NY8 510 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PNMA5Q96PV4 448 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 ADPGKQ9BRR6 497 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 ADAMTS10Q9H324 1103 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 ST6GALNAC4Q9H4F1 302 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 UBN1Q9NPG3 1134 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 KMT5AQ9NQR1 393 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 AAASQ9NRG9 546 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 CGNQ9P2M7 1197 aaKnown RBP7.6□□□□□ -1.19
CLDN4-204ENST00000466411 USP18Q9UMW8 372 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 SMG5Q9UPR3 1016 aaKnown RBP7.6□□□□□ -1.19
CLDN4-204ENST00000466411 EXOC7Q9UPT5 735 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 HPSEQ9Y251 543 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 CNTNAP2Q9UHC6 1331 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 USP9XQ93008 2570 aaPredicted RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 K7ERI5 159 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 N4BP3O15049 544 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 KIAA0391O15091 583 aaKnown RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 GDF9O60383 454 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 HIP1RO75146 1068 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 EOMESO95936 686 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 SNRPFP62306 86 aaKnown RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 UBE3AQ05086 875 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 ITIH3Q06033 890 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 CAPSQ13938 189 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 LPIN1Q14693 890 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 ECM1Q16610 540 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 DCAF4L1Q3SXM0 396 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 PHLDB3Q6NSJ2 640 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 SLC24A5Q71RS6 500 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 RTN4RL1Q86UN2 441 aaPredicted RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 CMTR2Q8IYT2 770 aaKnown RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 PDILTQ8N807 584 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 TDRD5Q8NAT2 981 aaKnown RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 GOLGA5Q8TBA6 731 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 TSC1Q92574 1164 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 DHX58Q96C10 678 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 PGBD4Q96DM1 585 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 THAP11Q96EK4 314 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 OSMRQ99650 979 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 C7orf25Q9BPX7 421 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 REEP2Q9BRK0 252 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 TRIM9Q9C026 710 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 ELAC1Q9H777 363 aaKnown RBP7.59□□□□□ -1.19
CLDN4-204ENST00000466411 TBC1D17Q9HA65 648 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 KCNK12Q9HB15 430 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 IFT122Q9HBG6 1241 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 XPNPEP1Q9NQW7 623 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 BLOC1S4Q9NUP1 217 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 AGPAT5Q9NUQ2 364 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 CACNA2D2Q9NY47 1150 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 STK39Q9UEW8 545 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 PADI3Q9ULW8 664 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 GINS2Q9Y248 185 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 PCDHGA2Q9Y5H1 932 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 DOCK8Q8NF50 2099 aa7.59□□□□□ -1.19
CLDN4-204ENST00000466411 FNDC1Q4ZHG4 1894 aaPredicted RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 A0A087WZ62 844 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 A0A1B0GVL5 298 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 FRMD3A2A2Y4 597 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 TMEM150BA6NC51 233 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 CCDC169A6NNP5 214 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 INO80B-WBP1J3KQ70 363 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ACKR2O00590 384 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ZBTB39O15060 712 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 EIF3DO15371 548 aaKnown RBP eCLIP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 TRAK2O60296 914 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ZNF202O95125 648 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 WEE2P0C1S8 567 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 SRGAP2CP0DJJ0 459 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 GHRP10912 638 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 GLRA2P23416 452 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 NPTX2P47972 431 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 NCKAP1LP55160 1127 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ASIC1P78348 528 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 POU5F1Q01860 360 aaKnown RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 GRIN1Q05586 938 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms