RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 CCDC121Q6ZUS5 278 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 KAT2BQ92831 832 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 KCNK9Q9NPC2 374 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
SLX4-202ENST00000466154 MROH7Q68CQ1 1323 aa17.44■□□□□ 0.38
SLX4-202ENST00000466154 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLX4-202ENST00000466154 BAG6P46379 1132 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 EIF3BP55884 814 aaKnown RBP17.43■□□□□ 0.38
SLX4-202ENST00000466154 TRPM4Q8TD43 1214 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 HAPLN2Q9GZV7 340 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 MAP3K20Q9NYL2 800 aaKnown RBP17.43■□□□□ 0.38
SLX4-202ENST00000466154 CTNNAL1Q9UBT7 734 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 PCYOX1Q9UHG3 505 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 COQ4Q9Y3A0 265 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLX4-202ENST00000466154 PCDHB2Q9Y5E7 798 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 TTLL13PA6NNM8 815 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 MAPK13O15264 365 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 STXBP2Q15833 593 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 CLUL1Q15846 466 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 ZBTB10Q96DT7 871 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 PRMT1Q99873 361 aaKnown RBP17.43■□□□□ 0.38
SLX4-202ENST00000466154 ADAM33Q9BZ11 813 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 APOBEC3GQ9HC16 384 aaKnown RBP17.43■□□□□ 0.38
SLX4-202ENST00000466154 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 TRAPPC3O43617 180 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 KRT10P13645 584 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 GLRA2P23416 452 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 TNFSF9P41273 254 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 HADHBP55084 474 aaKnown RBP17.43■□□□□ 0.38
SLX4-202ENST00000466154 SNRPFP62306 86 aaKnown RBP17.43■□□□□ 0.38
SLX4-202ENST00000466154 TRIM50Q86XT4 487 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 LRRC71Q8N4P6 559 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 PARP2Q9UGN5 583 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
SLX4-202ENST00000466154 ATP4AP20648 1035 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 KYNUQ16719 465 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 DPH6Q7L8W6 267 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 NTPCRQ9BSD7 190 aaKnown RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 INTS9Q9NV88 658 aaKnown RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 TLR3O15455 904 aaKnown RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 RIPK2O43353 540 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 STBD1O95210 358 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 GARTP22102 1010 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 NOP14P78316 857 aaKnown RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 ZNF365Q70YC5 407 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 RBBP8NLQ8NC74 664 aaPredicted RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 CDC42EP4Q9H3Q1 356 aaKnown RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 ARHGAP28Q9P2N2 729 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 DOCK5Q9H7D0 1870 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 BHMG1C9JSJ3 638 aaPredicted RBP17.42■□□□□ 0.38
SLX4-202ENST00000466154 OATP04181 439 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 EDN1P05305 212 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 POTEJP0CG39 1038 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 ITGA8P53708 1063 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 GCNT1Q02742 428 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 MTM1Q13496 603 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 LIN9Q5TKA1 542 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 SEC16BQ96JE7 1060 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 FBXL18Q96ME1 805 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 NUB1Q9Y5A7 615 aa17.42■□□□□ 0.38
SLX4-202ENST00000466154 VNN1O95497 513 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 ATF2P15336 505 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 TAS2R40P59535 323 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 PLCB3Q01970 1234 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 CUL2Q13617 745 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 SIX1Q15475 284 aaPredicted RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 PSPC1Q8WXF1 523 aaKnown RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 CDHR1Q96JP9 859 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 IMPG2Q9BZV3 1241 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 C17orf75Q9HAS0 396 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 MYPNQ86TC9 1320 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 SPDYE16A6NNV3 312 aaPredicted RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 GJB1P08034 283 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 UNGP13051 313 aaPredicted RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 CREB1P16220 341 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 PSMC4P43686 418 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 ZNF280AP59817 542 aaPredicted RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 TFAMQ00059 246 aaKnown RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 ORC1Q13415 861 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 BYSLQ13895 437 aaKnown RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 ZACNQ401N2 412 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 FAM182AQ5T1J6 154 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 GADL1Q6ZQY3 521 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 THNSL1Q8IYQ7 743 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 TMEM130Q8N3G9 435 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 C9orf72Q96LT7 481 aa17.41■□□□□ 0.38
SLX4-202ENST00000466154 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
SLX4-202ENST00000466154 MAFGO15525 162 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms