RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 GLI4P10075 376 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 PCP11498 1178 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 FCER1AP12319 257 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 ALAS1P13196 640 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 ATF2P15336 505 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 TARBP2Q15633 366 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 SYDE2Q5VT97 1194 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 EEF1DP3Q658K8 133 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 CREB3L3Q68CJ9 461 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 ADAT2Q7Z6V5 191 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 FAM160B2Q86V87 743 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 DGKHQ86XP1 1220 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 NT5DC4Q86YG4 428 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 RAB11FIP4Q86YS3 637 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 ADGRF4Q8IZF3 695 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 ABRAQ8N0Z2 381 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 FAM133AQ8N9E0 248 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 OR6P1Q8NGX9 317 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 CXorf38Q8TB03 319 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 CHURC1Q8WUH1 139 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 CLEC4DQ8WXI8 215 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 SHDQ96IW2 340 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 PAWRQ96IZ0 340 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 TCEANC2Q96MN5 208 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 TTC14Q96N46 770 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 KRT23Q9C075 422 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 KATNBL1Q9H079 304 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 JMJD4Q9H9V9 463 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 LY9Q9HBG7 655 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 RXFP1Q9HBX9 757 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 A1CFQ9NQ94 594 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 RNF146Q9NTX7 359 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 FBLN5Q9UBX5 448 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 CGGBP1Q9UFW8 167 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 OGDHLQ9ULD0 1010 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 TRIOBPQ9H2D6 2365 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 MYADML2A6NDP7 307 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 IFIT3O14879 490 aaKnown RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 PRC1O43663 620 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 CYTH3O43739 400 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 CDC45O75419 566 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 PPM1BO75688 479 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 ICAM1P05362 532 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 CENPBP07199 599 aaPredicted RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 COL6A1P12109 1028 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 SYN1P17600 705 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 RXRAP19793 462 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 CNGA1P29973 690 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 NASPP49321 788 aaPredicted RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 OAZ1P54368 228 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 TROAPQ12815 778 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 KCTD2Q14681 263 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 PPP2R5EQ16537 467 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 QRICH1Q2TAL8 776 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 VWA3BQ502W6 1294 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 GJC2Q5T442 439 aaPredicted RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 IFIT1BQ5T764 474 aaKnown RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 SLC30A10Q6XR72 485 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 IQCA1Q86XH1 822 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 ARHGEF39Q8N4T4 335 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 NCOA7Q8NI08 942 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 FNIP1Q8TF40 1166 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 TINF2Q9BSI4 451 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 ADAM7Q9H2U9 754 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 ACAD9Q9H845 621 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 KAT14Q9H8E8 782 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 VAT1LQ9HCJ6 419 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 CYP39A1Q9NYL5 469 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 COL20A1Q9P218 1284 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 SUSD2Q9UGT4 822 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 DBR1Q9UK59 544 aaKnown RBP5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 CCPG1Q9ULG6 757 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 RWDD3Q9Y3V2 267 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 LTBP2Q14767 1821 aa5.58□□□□□ -1.52
EXOSC3-204ENST00000465860 C2orf71A6NGG8 1288 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 KLRF2D3W0D1 207 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 SH2B2O14492 632 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 CTAGE5O15320 804 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 PLEKHA8P1O95397 391 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 PARP1P09874 1014 aaKnown RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 MC3RP41968 323 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 SEPHS1P49903 392 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 AMPD2Q01433 879 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 EXOSC10Q01780 885 aaKnown RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 BAATQ14032 418 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 GRM4Q14833 912 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 CDC37Q16543 378 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 LRRC26Q2I0M4 334 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 USH1GQ495M9 461 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 GPATCH4Q5T3I0 446 aaKnown RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 MFSD14CQ5VZR4 134 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 MAMDC4Q6UXC1 1216 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 NSMFQ6X4W1 530 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 ARMCX2Q7L311 632 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 CPNE8Q86YQ8 564 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 ANKRD35Q8N283 1001 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 ZNF513Q8N8E2 541 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 CHST13Q8NET6 341 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms