RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 EXOC3L4Q17RC7 722 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 GLRA4Q5JXX5 417 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-202ENST00000463060 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 ANKRD36BP1Q96IX9 119 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 CASD1Q96PB1 797 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL6A1-202ENST00000463060 CRACR2AQ9BSW2 395 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 XYLT2Q9H1B5 865 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-202ENST00000463060 RAB20Q9NX57 234 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 DPP3Q9NY33 737 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 UBQLN1Q9UMX0 589 aaKnown RBP15.49■□□□□ 0.07
COL6A1-202ENST00000463060 COL4A6Q14031 1691 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 EPHB6O15197 1021 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 TNNC2P02585 160 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 THP07101 528 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 TMEM191BP0C7N4 346 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 LRPAP1P30533 357 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 SCNN1GP51170 649 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 GUCY2FP51841 1108 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 DEFB103AP81534 67 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 NCOA4Q13772 614 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 NOMO2Q5JPE7 1267 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 SPECC1LQ69YQ0 1117 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 TRIM65Q6PJ69 517 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 GLB1LQ6UWU2 654 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 BEST2Q8NFU1 509 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 HELQQ8TDG4 1101 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 HERVK_113Q902F9 699 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 TTYH3Q9C0H2 523 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 INTS2Q9H0H0 1204 aaKnown RBP15.48■□□□□ 0.07
COL6A1-202ENST00000463060 GANQ9H2C0 597 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 TUBGCP4Q9UGJ1 667 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 ITGA11Q9UKX5 1188 aa15.48■□□□□ 0.07
COL6A1-202ENST00000463060 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-202ENST00000463060 RNF225M0QZC1 329 aaPredicted RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 PIRO00625 290 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 ZC3H11AO75152 810 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 DGKIO75912 1065 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 STAU1O95793 577 aaKnown RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 ASS1P00966 412 aaKnown RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 ITGB3P05106 788 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 ACTN1P12814 892 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 MYL6P60660 151 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 APBA1Q02410 837 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 DSC1Q08554 894 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 CETN1Q12798 172 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 GRIK3Q13003 919 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 KLHDC7AQ5VTJ3 777 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 PHLDB3Q6NSJ2 640 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 PSRC1Q6PGN9 363 aaPredicted RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 OTOP2Q7RTS6 562 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 ZNF689Q96CS4 500 aaPredicted RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 NAA15Q9BXJ9 866 aaKnown RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 VRTNQ9H8Y1 702 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 RC3H2Q9HBD1 1191 aaKnown RBP15.47■□□□□ 0.07
COL6A1-202ENST00000463060 SLC38A7Q9NVC3 462 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 GCNT4Q9P109 453 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 KANSL3Q9P2N6 904 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 FBXL5Q9UKA1 691 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 NR2E3Q9Y5X4 410 aa15.47■□□□□ 0.07
COL6A1-202ENST00000463060 PPEF2O14830 753 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 HOXA2O43364 376 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 XPOTO43592 962 aaKnown RBP15.46■□□□□ 0.07
COL6A1-202ENST00000463060 B4GALT3O60512 393 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 DDHD2O94830 711 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 POMCP01189 267 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 AMHP03971 560 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 GATMP50440 423 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 BIRC3Q13489 604 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 ZNF280BQ86YH2 543 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 TAF4BQ92750 862 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 RPS6KC1Q96S38 1066 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 APOBEC3GQ9HC16 384 aaKnown RBP15.46■□□□□ 0.07
COL6A1-202ENST00000463060 TBC1D13Q9NVG8 400 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 CXXC1Q9P0U4 656 aaPredicted RBP15.46■□□□□ 0.07
COL6A1-202ENST00000463060 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 PTPRSQ13332 1948 aa15.46■□□□□ 0.07
COL6A1-202ENST00000463060 FNDC1Q4ZHG4 1894 aaPredicted RBP15.46■□□□□ 0.06
COL6A1-202ENST00000463060 TULP1O00294 542 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 PHACTR2O75167 634 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 GYPCP04921 128 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 IBSPP21815 317 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 IGFBP6P24592 240 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 ATICP31939 592 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 RPL9P32969 192 aaKnown RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 RBP5P82980 135 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 TUSC3Q13454 348 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 CD300LGQ6UXG3 332 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 TMC6Q7Z403 805 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 COLGALT2Q8IYK4 626 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 LRRC52Q8N7C0 313 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 TATDN2Q93075 761 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms