RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 FNIP2Q9P278 1114 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 PRKAG3Q9UGI9 489 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 USP25Q9UHP3 1055 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 UBQLN1Q9UMX0 589 aaKnown RBP20.5■□□□□ 0.87
COL9A3-203ENST00000462700 TCF20Q9UGU0 1960 aaKnown RBP20.49■□□□□ 0.87
COL9A3-203ENST00000462700 PVALEFA0A1B0GWK0 134 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 EIF3DO15371 548 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL9A3-203ENST00000462700 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 SYKP43405 635 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 BRCC3P46736 316 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 NDUFA8P51970 172 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 CREMQ03060 361 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 PRSS55Q6UWB4 352 aaPredicted RBP20.49■□□□□ 0.87
COL9A3-203ENST00000462700 CD302Q8IX05 232 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 FSIP1Q8NA03 581 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 PIK3R5Q8WYR1 880 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 SUSD6Q92537 303 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 FAM212AQ96EL1 285 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 FBXL18Q96ME1 805 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 TSPAN18Q96SJ8 248 aa20.49■□□□□ 0.87
COL9A3-203ENST00000462700 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.49■□□□□ 0.87
COL9A3-203ENST00000462700 CYP3A5P20815 502 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 GARTP22102 1010 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 FGFR3P22607 806 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 POU5F1Q01860 360 aaKnown RBP20.48■□□□□ 0.87
COL9A3-203ENST00000462700 ZP2Q05996 745 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 CRELD2Q6UXH1 353 aaPredicted RBP20.48■□□□□ 0.87
COL9A3-203ENST00000462700 EPM2AIP1Q7L775 607 aaPredicted RBP20.48■□□□□ 0.87
COL9A3-203ENST00000462700 ADHFE1Q8IWW8 467 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 TMEM130Q8N3G9 435 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 LNX1Q8TBB1 728 aaPredicted RBP20.48■□□□□ 0.87
COL9A3-203ENST00000462700 GOLPH3LQ9H4A5 285 aa20.48■□□□□ 0.87
COL9A3-203ENST00000462700 MUC3AQ02505 3323 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 I3L4J1 428 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 XPOTO43592 962 aaKnown RBP20.47■□□□□ 0.87
COL9A3-203ENST00000462700 GLUD1P00367 558 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 RPL17P18621 184 aaKnown RBP20.47■□□□□ 0.87
COL9A3-203ENST00000462700 LRPAP1P30533 357 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 ITIH3Q06033 890 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 PSMD5Q16401 504 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 JADE1Q6IE81 842 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 PDXDC1Q6P996 788 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 C12orf76Q8N812 135 aaPredicted RBP20.47■□□□□ 0.87
COL9A3-203ENST00000462700 ZNF507Q8TCN5 953 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 SAAL1Q96ER3 474 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 CBWD1Q9BRT8 395 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 ADAM7Q9H2U9 754 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 ASB7Q9H672 318 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 CD320Q9NPF0 282 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 DERAQ9Y315 318 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 NUB1Q9Y5A7 615 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 CITO14578 2027 aa20.47■□□□□ 0.87
COL9A3-203ENST00000462700 KLRC4O43908 158 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 LDHAP00338 332 aaKnown RBP20.46■□□□□ 0.87
COL9A3-203ENST00000462700 NFICP08651 508 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 TKTP29401 623 aaKnown RBP20.46■□□□□ 0.87
COL9A3-203ENST00000462700 HOXD13P35453 343 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 TMEM132DQ14C87 1099 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 RARS2Q5T160 578 aaKnown RBP20.46■□□□□ 0.87
COL9A3-203ENST00000462700 SPATA1Q5VX52 437 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 ARMCX5Q6P1M9 558 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 GLYCTKQ8IVS8 523 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 GJD3Q8N144 294 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 ZSWIM2Q8NEG5 633 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 BEST2Q8NFU1 509 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 CLSTN3Q9BQT9 956 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 FAM213AQ9BRX8 229 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 MAN1C1Q9NR34 630 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 UBE4BO95155 1302 aa20.46■□□□□ 0.87
COL9A3-203ENST00000462700 PDCD11Q14690 1871 aaKnown RBP20.45■□□□□ 0.86
COL9A3-203ENST00000462700 C1RP00736 705 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 MYL1P05976 194 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 GUCY2FP51841 1108 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 CBX2Q14781 532 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-203ENST00000462700 CES5AQ6NT32 575 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 KANK3Q6NY19 840 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 PALB2Q86YC2 1186 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 SCFD1Q8WVM8 642 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 POP1Q99575 1024 aaKnown RBP20.45■□□□□ 0.86
COL9A3-203ENST00000462700 PCIF1Q9H4Z3 704 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 SFXN1Q9H9B4 322 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 SLC39A2Q9NP94 309 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 MTRRQ9UBK8 725 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 CDH22Q9UJ99 828 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 C2CD2Q9Y426 696 aa20.45■□□□□ 0.86
COL9A3-203ENST00000462700 C19orf67A6NJJ6 358 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 SPDYE4A6NLX3 237 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 SYN3O14994 580 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 KIAA0391O15091 583 aaKnown RBP20.44■□□□□ 0.86
COL9A3-203ENST00000462700 TGM5O43548 720 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 EXTL3O43909 919 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 IL18RAPO95256 599 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 SSTR3P32745 418 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-203ENST00000462700 MCM4P33991 863 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 LILRA6Q6PI73 481 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 KRBA2Q6ZNG9 492 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 ANKS3Q6ZW76 656 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 BRSK2Q8IWQ3 736 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms