RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 IFIT3O14879 490 aaKnown RBP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 ORC4O43929 436 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 PRDM1O75626 825 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 PTPN1P18031 435 aaKnown RBP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 RAP1GAPP47736 663 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 MASP1P48740 699 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 PICALMQ13492 652 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 TNIP1Q15025 636 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 PKN1Q16512 942 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 SLC4A8Q2Y0W8 1093 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 PKN3Q6P5Z2 889 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 NOSTRINQ8IVI9 506 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 AGBL3Q8NEM8 1001 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 IGDCC4Q8TDY8 1250 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 ZNF274Q96GC6 653 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 HDAC9Q9UKV0 1011 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 NAP1L2Q9ULW6 460 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 WASF3Q9UPY6 502 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 KCTD3Q9Y597 815 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 PCDHAC2Q9Y5I4 1007 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 MYH2Q9UKX2 1941 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 KLF18A0A0U1RQI7 1052 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 ERICH2A1L162 156 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 PTPDC1A2A3K4 754 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 RANBP6O60518 1105 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 PFKFB2O60825 505 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 WDHD1O75717 1129 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 PLA2G1BP04054 148 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 CYP2C8P10632 490 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 FAHP16930 419 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 POU3F2P20265 443 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 PDIA3P30101 505 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 PLCD1P51178 756 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 EVCP57679 992 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 NKX3-2P78367 333 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 ST3GAL1Q11201 340 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 SART3Q15020 963 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 SEPT7Q16181 437 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 ZC3H18Q86VM9 953 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 FAM129CQ86XR2 697 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 THNSL2Q86YJ6 484 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 NXPE1Q8N323 547 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 TMTC2Q8N394 836 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 UBR7Q8N806 425 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 ZNF526Q8TF50 670 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 CHMP4CQ96CF2 233 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 DYNLL2Q96FJ2 89 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 GORASP1Q9BQQ3 440 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 CABP5Q9NP86 173 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 NMRK2Q9NPI5 230 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 DDX4Q9NQI0 724 aaKnown RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 SMC3Q9UQE7 1217 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 SCN9AQ15858 1988 aa8.47□□□□□ -1.05
UBE4B-204ENST00000462658 ZNF646O15015 1829 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-204ENST00000462658 WDR90Q96KV7 1748 aa8.46□□□□□ -1.05
UBE4B-204ENST00000462658 CCDC69A6NI79 296 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF891A8MT65 544 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 FZD9O00144 591 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 CLASP2O75122 1294 aaKnown RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 ZBTB48P10074 688 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 LIFRP42702 1097 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 NT5C2P49902 561 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 LINC00310P59036 64 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 CCT2P78371 535 aaKnown RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 NUCB2P80303 420 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 IRF9Q00978 393 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 WTAPQ15007 396 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 DLGAP5Q15398 846 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 KCNA10Q16322 511 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 TMC5Q6UXY8 1006 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 OTOP1Q7RTM1 612 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 IQCA1Q86XH1 822 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF444Q8N0Y2 327 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 PPM1KQ8N3J5 372 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 BHLHE22Q8NFJ8 381 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 LEO1Q8WVC0 666 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 UBAC1Q9BSL1 405 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 IDI2Q9BXS1 227 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 OSBPL5Q9H0X9 879 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 TDRD3Q9H7E2 651 aaKnown RBP8.46□□□□□ -1.06
UBE4B-204ENST00000462658 LY9Q9HBG7 655 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF287Q9HBT7 754 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 ROBO3Q96MS0 1386 aa8.46□□□□□ -1.06
UBE4B-204ENST00000462658 LAMA4Q16363 1823 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 TSPY2A6NKD2 308 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 GOLGA8BA8MQT2 603 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 C4BPAP04003 597 aaKnown RBP8.45□□□□□ -1.06
UBE4B-204ENST00000462658 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 RPS12P25398 132 aaKnown RBP8.45□□□□□ -1.06
UBE4B-204ENST00000462658 GJB2P29033 226 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 MMP14P50281 582 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 CACNB3P54284 484 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 TFAP4Q01664 338 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 SMAD4Q13485 552 aaKnown RBP8.45□□□□□ -1.06
UBE4B-204ENST00000462658 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 CNKSR3Q6P9H4 555 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms