RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SLC6A9P48067 706 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 ANTXR2P58335 489 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 ICA1Q05084 483 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 CD69Q07108 199 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 MAP3K12Q12852 859 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 TARDBPQ13148 414 aaKnown RBP eCLIP3.56□□□□□ -1.84
HPS3-203ENST00000460822 USP10Q14694 798 aaKnown RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 CNGA2Q16280 664 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 KHDC1Q4VXA5 237 aaKnown RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 CCDC38Q502W7 563 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 HS1BP3Q53T59 392 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 FAM180AQ6UWF9 173 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 Q6ZVL8 140 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 CELF5Q8N6W0 485 aaKnown RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 GIMAP8Q8ND71 665 aaPredicted RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 CCHCR1Q8TD31 782 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 HOXB13Q92826 284 aaPredicted RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 AJUBAQ96IF1 538 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 PAWRQ96IZ0 340 aaKnown RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 MRGPRX4Q96LA9 322 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 CARD11Q9BXL7 1154 aa3.56□□□□□ -1.84
HPS3-203ENST00000460822 POLR3BQ9NW08 1133 aaPredicted RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 FBXO9Q9UK97 447 aaPredicted RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 MAGED2Q9UNF1 606 aaPredicted RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 LAS1LQ9Y4W2 734 aaKnown RBP3.56□□□□□ -1.84
HPS3-203ENST00000460822 RPTORQ8N122 1335 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 MYO1FO00160 1098 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 FOXN3O00409 490 aaPredicted RBP3.55□□□□□ -1.84
HPS3-203ENST00000460822 FGF18O76093 207 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 KLHL18O94889 574 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 ENDOD1O94919 500 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 IL18RAPO95256 599 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 LY86O95711 162 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 IL18BPO95998 194 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 PARP1P09874 1014 aaKnown RBP3.55□□□□□ -1.84
HPS3-203ENST00000460822 SRGNP10124 158 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 COL6A1P12109 1028 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 TYRP14679 529 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 RPL17P18621 184 aaKnown RBP3.55□□□□□ -1.84
HPS3-203ENST00000460822 ECHS1P30084 290 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 ADCY8P40145 1251 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 DAG1Q14118 895 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 MST1LQ2TV78 715 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 KLHDC7AQ5VTJ3 777 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 GRAMD4Q6IC98 578 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 ABHD15Q6UXT9 468 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 RSPH3Q86UC2 560 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 RNF152Q8N8N0 203 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 PPP1R14CQ8TAE6 165 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 TRIM63Q969Q1 353 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 ARL8AQ96BM9 186 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 TMX3Q96JJ7 454 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 LMF1Q96S06 567 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 ISCA1Q9BUE6 129 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 SEC61A2Q9H9S3 476 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 AGO4Q9HCK5 861 aaKnown RBP3.55□□□□□ -1.84
HPS3-203ENST00000460822 PNPOQ9NVS9 261 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 CPNE7Q9UBL6 633 aa3.55□□□□□ -1.84
HPS3-203ENST00000460822 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.55□□□□□ -1.84
HPS3-203ENST00000460822 APOL1O14791 398 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 NPR1P16066 1061 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 POLD1P28340 1107 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 CSF2RBP32927 897 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 TECP42680 631 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MAPK9P45984 424 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 FMO1Q01740 532 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 STARD3Q14849 445 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 PUM3Q15397 648 aaKnown RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 STILQ15468 1287 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SLC4A8Q2Y0W8 1093 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 ZMAT1Q5H9K5 638 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MMS22LQ6ZRQ5 1243 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 OTOP2Q7RTS6 562 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SESTD1Q86VW0 696 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 ZNF527Q8NB42 609 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 FAM167AQ96KS9 214 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 PDCD2LQ9BRP1 358 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 UNKQ9C0B0 810 aaKnown RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 MANSC1Q9H8J5 431 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 STK32BQ9NY57 414 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MAP3K20Q9NYL2 800 aaKnown RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 ZNF69Q9UC07 566 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 FEZ2Q9UHY8 353 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 FBXO10Q9UK96 956 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 PCDHA6Q9UN73 950 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 GPR52Q9Y2T5 361 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SLC4A7Q9Y6M7 1214 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 A0A1W2PR48 441 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 ISM1B1AKI9 464 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 ADAMTS3O15072 1205 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SUV39H1O43463 412 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MAFO75444 373 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 AGR2O95994 175 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MALP21145 153 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SUMO3P55854 103 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 PER3P56645 1201 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MEF2AQ02078 507 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 BLMHQ13867 455 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 RAB39AQ14964 217 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MAPRE1Q15691 268 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms