RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.37
CPNE6-202ENST00000460657 BAG2O95816 211 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 RARRES1P49788 294 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 CDO1Q16878 200 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 ATG16L1Q676U5 607 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 C4orf19Q8IY42 314 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 NME8Q8N427 588 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 RIBC1Q8N443 379 aaPredicted RBP12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SCFD2Q8WU76 684 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 TEX13BQ9BXU2 312 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SEPT10Q9P0V9 454 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.37
CPNE6-202ENST00000460657 COMMD10Q9Y6G5 202 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 CAPN9O14815 690 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 ZBTB39O15060 712 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 NOP14P78316 857 aaKnown RBP12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 IQCKQ8N0W5 287 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 TAS1R2Q8TE23 839 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 SYNPO2Q9UMS6 1093 aa12.77□□□□□ -0.37
CPNE6-202ENST00000460657 ITIH4Q14624 930 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 DACT2Q5SW24 774 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 ARHGEF19Q8IW93 802 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 GABPB2Q8TAK5 448 aaPredicted RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 GPRASP2Q96D09 838 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 PSMD10O75832 226 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 RXRBP28702 533 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 HMGCS2P54868 508 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 FEZF2Q8TBJ5 459 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 FAM118BQ9BPY3 351 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 VCX3BQ9H321 246 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 CDC42EP4Q9H3Q1 356 aaKnown RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 SALL4Q9UJQ4 1053 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 PIK3CDO00329 1044 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 KRT3P12035 628 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 ARL4AP40617 200 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 IRX4P78413 519 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 SLC20A2Q08357 652 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 CYB5D1Q6P9G0 228 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 LNX1Q8TBB1 728 aaPredicted RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 ATG4AQ8WYN0 398 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 MAML1Q92585 1016 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 CYP26B1Q9NR63 512 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 GARTP22102 1010 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 KIF22Q14807 665 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 MAP3K21Q5TCX8 1036 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
CPNE6-202ENST00000460657 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
CPNE6-202ENST00000460657 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 NFIBO00712 420 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 LMNAP02545 664 aaKnown RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 SCTRP47872 440 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 ITGB3BPQ13352 177 aaPredicted RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 AFAP1L2Q8N4X5 818 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 C7orf31Q8N865 590 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 MCEEQ96PE7 176 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 NCANO14594 1321 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 KRT38O76015 456 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 HAUS5O94927 633 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 STAT5BP51692 787 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 SV2AQ7L0J3 742 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 CCDC125Q86Z20 511 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 RHPN2Q8IUC4 686 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 HES6Q96HZ4 224 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 BCAP29Q9UHQ4 241 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 USH1CQ9Y6N9 552 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 PHRF1Q9P1Y6 1649 aaKnown RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 GYG2O15488 501 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 XPOTO43592 962 aaKnown RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 TRAPPC3O43617 180 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 RRM1P23921 792 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 RPL21P46778 160 aaKnown RBP12.75□□□□□ -0.37
CPNE6-202ENST00000460657 TMPRSS15P98073 1019 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 CUL2Q13617 745 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms