RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 MYPNQ86TC9 1320 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 THAP12O43422 761 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 RALAP11233 206 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 UNGP13051 313 aaPredicted RBP19.35■□□□□ 0.69
HPS3-202ENST00000460120 EIF3BP55884 814 aaKnown RBP19.35■□□□□ 0.69
HPS3-202ENST00000460120 TMEM174Q8WUU8 243 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 CNKSR2Q8WXI2 1034 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 HVCN1Q96D96 273 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 TCHPQ9BT92 498 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 PDLIM7Q9NR12 457 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.35■□□□□ 0.69
HPS3-202ENST00000460120 PMM2O15305 246 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 RIPK2O43353 540 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 GARTP22102 1010 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 GNA15P30679 374 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 LRRC14Q15048 493 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 CLUL1Q15846 466 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 ATP13A4Q4VNC1 1196 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 XKR3Q5GH77 459 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 TAX1BP1Q86VP1 789 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 CTNNAL1Q9UBT7 734 aa19.35■□□□□ 0.69
HPS3-202ENST00000460120 TNFSF9P41273 254 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 TAS2R40P59535 323 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 GCNT1Q02742 428 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 CRELD2Q6UXH1 353 aaPredicted RBP19.34■□□□□ 0.69
HPS3-202ENST00000460120 CDR2LQ86X02 465 aaPredicted RBP19.34■□□□□ 0.69
HPS3-202ENST00000460120 TLCD1Q96CP7 247 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 ADAM22Q9P0K1 906 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 PCDHB2Q9Y5E7 798 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 LOXHD1Q8IVV2 1947 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 SPRED3Q2MJR0 410 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 MICALCLQ6ZW33 695 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 RDM1Q8NG50 284 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 CABS1Q96KC9 395 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 SENP7Q9BQF6 1050 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 CDC42EP4Q9H3Q1 356 aaKnown RBP19.34■□□□□ 0.69
HPS3-202ENST00000460120 NUB1Q9Y5A7 615 aa19.34■□□□□ 0.69
HPS3-202ENST00000460120 SPDYE16A6NNV3 312 aaPredicted RBP19.33■□□□□ 0.69
HPS3-202ENST00000460120 SPATA31C2B4DYI2 1134 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 GGPS1O95749 300 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 C4BPAP04003 597 aaKnown RBP19.33■□□□□ 0.69
HPS3-202ENST00000460120 TCF4P15884 667 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 ADCY8P40145 1251 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 OSTNP61366 133 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 TCEAL1Q15170 157 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 ZACNQ401N2 412 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 SCARA5Q6ZMJ2 495 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 ANKS1BQ7Z6G8 1248 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 TMEM130Q8N3G9 435 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 SLC7A3Q8WY07 619 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 ART4Q93070 314 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 PRMT1Q99873 361 aaKnown RBP19.33■□□□□ 0.69
HPS3-202ENST00000460120 C17orf75Q9HAS0 396 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 GGA3Q9NZ52 723 aa19.33■□□□□ 0.69
HPS3-202ENST00000460120 RASGRF2O14827 1237 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 OATP04181 439 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 NUDT17P0C025 328 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 GTF2H1P32780 548 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 CUL2Q13617 745 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 HP1BP3Q5SSJ5 553 aaPredicted RBP19.33■□□□□ 0.68
HPS3-202ENST00000460120 RBBP8NLQ8NC74 664 aaPredicted RBP19.33■□□□□ 0.68
HPS3-202ENST00000460120 MORC4Q8TE76 937 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 HAUS1Q96CS2 278 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 SEC16BQ96JE7 1060 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 XPO6Q96QU8 1125 aaKnown RBP19.33■□□□□ 0.68
HPS3-202ENST00000460120 RGS17Q9UGC6 210 aaPredicted RBP19.33■□□□□ 0.68
HPS3-202ENST00000460120 TBK1Q9UHD2 729 aa19.33■□□□□ 0.68
HPS3-202ENST00000460120 GOLGA6L7A0A1B0GV03 622 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 DKC1O60832 514 aaKnown RBP eCLIP19.32■□□□□ 0.68
HPS3-202ENST00000460120 SRGAP2CP0DJJ0 459 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 CREB1P16220 341 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 ITGA8P53708 1063 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 DRG2P55039 364 aaKnown RBP19.32■□□□□ 0.68
HPS3-202ENST00000460120 PSMD6Q15008 389 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 PARP2Q9UGN5 583 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 MAFGO15525 162 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 KRT10P13645 584 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 STXBP2Q15833 593 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 KYNUQ16719 465 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 TREML2Q5T2D2 321 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 XRRA1Q6P2D8 792 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 CATSPERGQ6ZRH7 1159 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 R3HDMLQ9H3Y0 253 aa19.32■□□□□ 0.68
HPS3-202ENST00000460120 NOP14P78316 857 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 SLC20A2Q08357 652 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 BYSLQ13895 437 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 CYP1B1Q16678 543 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 C15orf39Q6ZRI6 1047 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 PAGR1Q9BTK6 254 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 PLVAPQ9BX97 442 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 FSCN2O14926 492 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 TLR3O15455 904 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 CST3P01034 146 aaPredicted RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 FNTAP49354 379 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 RPL7AP62424 266 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 CCDC121Q6ZUS5 278 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms