RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 USP15Q9Y4E8 981 aaPredicted RBP6.54□□□□□ -1.36
UBQLN4-202ENST00000459954 TLL2Q9Y6L7 1015 aa6.54□□□□□ -1.36
UBQLN4-202ENST00000459954 ZHX2Q9Y6X8 837 aa6.54□□□□□ -1.36
UBQLN4-202ENST00000459954 NFASCO94856 1347 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ADGRA3Q8IWK6 1321 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 TLDC2A0PJX2 215 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 FAM196BA6NMK8 535 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ZBTB39O15060 712 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 MAGEB2O15479 319 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CDH16O75309 829 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 LRRN2O75325 713 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 WFS1O76024 890 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 EGFRP00533 1210 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ITGB5P18084 799 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 DSG3P32926 999 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PTPN7P35236 360 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CAP2P40123 477 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CETN2P41208 172 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 GCLMP48507 274 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 SNAP25P60880 206 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 COPS2P61201 443 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 JAG1P78504 1218 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 IFI35P80217 286 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 MAP2K1Q02750 393 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 BNIP1Q12981 228 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 RRP1BQ14684 758 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PPP1R7Q15435 360 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 SNRNP35Q16560 246 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 DEFB115Q30KQ5 88 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 TKFCQ3LXA3 575 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 SGO2Q562F6 1265 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 BRDTQ58F21 947 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ZC3H12AQ5D1E8 599 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 LDLRAD1Q5T700 205 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 LIN9Q5TKA1 542 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF746Q6NUN9 644 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 C15orf39Q6ZRI6 1047 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 RGS9BPQ6ZS82 235 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 OTUD6AQ7L8S5 288 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ANKS1BQ7Z6G8 1248 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ANKRD13AQ8IZ07 590 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 MCOLN2Q8IZK6 566 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ANKRD35Q8N283 1001 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CCDC89Q8N998 374 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PROCA1Q8NCQ7 364 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 BANK1Q8NDB2 785 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 TMEM161BQ8NDZ6 487 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 MDM1Q8TC05 714 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PLEKHO2Q8TD55 490 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 LPAR1Q92633 364 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ARHGEF2Q92974 986 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF653Q96CK0 615 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 FAM212AQ96EL1 285 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CDCA5Q96FF9 252 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 MAGEB18Q96M61 343 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 TTC25Q96NG3 672 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 UIMC1Q96RL1 719 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 SELENOSQ9BQE4 189 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 JPH2Q9BR39 696 aaPredicted RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CBWD1Q9BRT8 395 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 DCLK3Q9C098 648 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CDC42EP4Q9H3Q1 356 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 EBF2Q9HAK2 575 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 VEZTQ9HBM0 779 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 MRPL47Q9HD33 250 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 BATF3Q9NR55 127 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 AAASQ9NRG9 546 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 KCNH7Q9NS40 1196 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 RAB20Q9NX57 234 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 SENP1Q9P0U3 644 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PRKAG3Q9UGI9 489 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 FETUBQ9UGM5 382 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 TPX2Q9ULW0 747 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 TBX20Q9UMR3 447 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 RPL26L1Q9UNX3 145 aaKnown RBP6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CNTN6Q9UQ52 1028 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 NEU2Q9Y3R4 380 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PCDHB2Q9Y5E7 798 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 CSADQ9Y600 493 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 PHIPQ8WWQ0 1821 aa6.53□□□□□ -1.36
UBQLN4-202ENST00000459954 SSC5DA1L4H1 1573 aa6.52□□□□□ -1.36
UBQLN4-202ENST00000459954 MGAMO43451 1857 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SMAPO00193 183 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 WDR46O15213 610 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 TP73O15350 636 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PRPF4O43172 522 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CYP26A1O43174 497 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CHMP2AO43633 222 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PROSCO94903 275 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ATP6V1G2O95670 118 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ALDH1A1P00352 501 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PIGRP01833 764 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ASNSP08243 561 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 VIMP08670 466 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 NQO1P15559 274 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CNGA1P29973 690 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 MAPK4P31152 587 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms