RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 RNF25Q96BH1 459 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 TLCD1Q96CP7 247 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 TRIM11Q96F44 468 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 PCYT2Q99447 389 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 APOBEC3GQ9HC16 384 aaKnown RBP19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 A0A0B4J269 797 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 GSTTP1A0A1W2PQM5 241 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 RRM1P23921 792 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 PIK3CAP42336 1068 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 ALDH5A1P51649 535 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 PPP2R2AP63151 447 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 TARBP2Q15633 366 aaKnown RBP19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 ZBTB41Q5SVQ8 909 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 FBXW10Q5XX13 1052 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 SEPT14Q6ZU15 432 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 CPA5Q8WXQ8 436 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 SLCO2A1Q92959 643 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 ART4Q93070 314 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 TRIM7Q9C029 511 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 BCCIPQ9P287 314 aaKnown RBP eCLIP19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 ADGRA2Q96PE1 1338 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 LRRIQ4A6NIV6 560 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 USP2O75604 605 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 KIAA0754O94854 1291 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 LDHAP00338 332 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 EDN1P05305 212 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 HIRAP54198 1017 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 IRX3P78415 501 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 MON1BQ7L1V2 547 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 CCDC105Q8IYK2 499 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 ANKRD35Q8N283 1001 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 CGRRF1Q99675 332 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 TARS2Q9BW92 718 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 TMEM134Q9H6X4 195 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 YY1AP1Q9H869 796 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 RBAKQ9NYW8 714 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 GPRC5DQ9NZD1 345 aa19.62■□□□□ 0.73
SEMA3B-209ENST00000456560 DCDC2CA8MYV0 355 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 CLDN3O15551 220 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 SHBGP04278 402 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 SLC1A1P43005 524 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 IFFO1Q0D2I5 559 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 CUL2Q13617 745 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 LBX2Q6XYB7 198 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 NLRP14Q86W24 1093 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 SLC7A3Q8WY07 619 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 CYFIP2Q96F07 1278 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 PAGR1Q9BTK6 254 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 MSTO1Q9BUK6 570 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 CNTN6Q9UQ52 1028 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 CNTNAP2Q9UHC6 1331 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 UBA1P22314 1058 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 HNRNPH1P31943 449 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 RFC5P40937 340 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 KCNJ1P48048 391 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 MAGOHP61326 146 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 PLVAPQ9BX97 442 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 MTRF1LQ9UGC7 380 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 FBXO40Q9UH90 709 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 SNCAIPQ9Y6H5 919 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 PASKQ96RG2 1323 aa19.61■□□□□ 0.73
SEMA3B-209ENST00000456560 PEX10O60683 326 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 FARP2O94887 1054 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 EDNRBP24530 442 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 SEC24CP53992 1094 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 TREML2Q5T2D2 321 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 SPATS2Q86XZ4 545 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 OTUD6BQ8N6M0 293 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 MYCBPAPQ8TBZ2 947 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 ZNF473Q8WTR7 871 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 CCT8L2Q96SF2 557 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 FAM129AQ9BZQ8 928 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 BTBD7Q9P203 1132 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 DICER1Q9UPY3 1922 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 CFHP08603 1231 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 CLTAP09496 248 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 NSFP46459 744 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 DENND2CQ68D51 928 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 LLGL2Q6P1M3 1020 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 TRIM72Q6ZMU5 477 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 RIOX2Q8IUF8 465 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 ABRAQ8N0Z2 381 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 GPC2Q8N158 579 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 DDX27Q96GQ7 796 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 SEMA4AQ9H3S1 761 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 NRBP2Q9NSY0 501 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 CAPN7Q9Y6W3 813 aa19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 ATXN2Q99700 1313 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-209ENST00000456560 SOWAHBA6NEL2 793 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 CAND2O75155 1236 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 FAM107AO95990 144 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 PAEPP09466 180 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 PTP4A2Q12974 167 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 CAPSQ13938 189 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 ODF2Q5BJF6 829 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 PHLDB2Q86SQ0 1253 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 HOOK3Q86VS8 718 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 OR5B17Q8NGF7 314 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 PTPN22Q9Y2R2 807 aa19.59■□□□□ 0.73
SEMA3B-209ENST00000456560 PCDHB4Q9Y5E5 795 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms