RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ITIH3Q06033 890 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 PSMD5Q16401 504 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 RTP2Q5QGT7 225 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 FAM26FQ5R3K3 315 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 CNNM4Q6P4Q7 775 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 ADHFE1Q8IWW8 467 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 C12orf76Q8N812 135 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 FSIP1Q8NA03 581 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 BEST2Q8NFU1 509 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 HPS3Q969F9 1004 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 IKZF4Q9H2S9 585 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 FNIP2Q9P278 1114 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 STYXL1Q9Y6J8 313 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 A0A0C4DFX4 3053 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 PVALEFA0A1B0GWK0 134 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 I3L4J1 428 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 RPL17P18621 184 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 MCM4P33991 863 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 BRCC3P46736 316 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 CUL4BQ13620 913 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 ATAT1Q5SQI0 421 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 ARMCX5Q6P1M9 558 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 GRAMD1CQ8IYS0 662 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 CCDC47Q96A33 483 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 PAGE5Q96GU1 130 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 CCDC34Q96HJ3 373 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 RIPOR3Q96MK2 946 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 FAM213AQ9BRX8 229 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 FGFBP2Q9BYJ0 223 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 S1PR5Q9H228 398 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 ADAM7Q9H2U9 754 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 ASB7Q9H672 318 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 TUBGCP4Q9UGJ1 667 aa19.64■□□□□ 0.73
PDLIM2-215ENST00000456545 A0A1W2PQ27 194 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 A0A1W2PQ64 194 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 A0A1W2PQD8 194 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 MEFVO15553 781 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 FAM189A1O60320 539 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 SPATA31D3P0C874 917 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 CYP3A5P20815 502 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 GARTP22102 1010 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 MTHFRP42898 656 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 CBX2Q14781 532 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 TMEM132DQ14C87 1099 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 JADE1Q6IE81 842 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 TMC5Q6UXY8 1006 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 SPATA31D4Q6ZUB0 917 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 LNX1Q8TBB1 728 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 PIK3R5Q8WYR1 880 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 PCIF1Q9H4Z3 704 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 SFXN1Q9H9B4 322 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 MAN1C1Q9NR34 630 aa19.63■□□□□ 0.73
PDLIM2-215ENST00000456545 EIF3DO15371 548 aaKnown RBP eCLIP19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 ACTN4O43707 911 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 IL18RAPO95256 599 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 FGFR3P22607 806 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 IGFBP6P24592 240 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 TKTP29401 623 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 ADSSP30520 456 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 NDUFA8P51970 172 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 POU5F1Q01860 360 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 ZP2Q05996 745 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 ANKS3Q6ZW76 656 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 C3orf58Q8NDZ4 430 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 SAAL1Q96ER3 474 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 RPGRIP1Q96KN7 1286 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 NECTIN4Q96NY8 510 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 PHF7Q9BWX1 381 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 SLC39A2Q9NP94 309 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 EXOC1Q9NV70 894 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 HPSEQ9Y251 543 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 DERAQ9Y315 318 aa19.62■□□□□ 0.73
PDLIM2-215ENST00000456545 GOLGA8IPA6NC78 632 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 GOLGA8JA6NMD2 632 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 H7C4K7 107 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 KIAA0391O15091 583 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 TGM5O43548 720 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 ADRB2P07550 413 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 ZBTB6Q15916 424 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 KANK3Q6NY19 840 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 CD300LGQ6UXG3 332 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 DSTYKQ6XUX3 929 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 NELFCDQ8IXH7 590 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 GLIS3Q8NEA6 775 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 APPL2Q8NEU8 664 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 ZNF507Q8TCN5 953 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 PLEKHA4Q9H4M7 779 aa19.61■□□□□ 0.73
PDLIM2-215ENST00000456545 SYN3O14994 580 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 EXTL3O43909 919 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 MYL1P05976 194 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 NFICP08651 508 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 WEE2P0C1S8 567 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 LRPAP1P30533 357 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 OR1D2P34982 312 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 PSMD2Q13200 908 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 SPATA1Q5VX52 437 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 HS2ST1Q7LGA3 356 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 GPD1LQ8N335 351 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms