RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 HERC4Q5GLZ8 1057 aaPredicted RBP12.91□□□□□ -0.34
TMEM56-202ENST00000455656 L1TD1Q5T7N2 865 aaKnown RBP12.91□□□□□ -0.34
TMEM56-202ENST00000455656 TMC5Q6UXY8 1006 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 GPR149Q86SP6 731 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 RNF135Q8IUD6 432 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 GLYCTKQ8IVS8 523 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 ZSWIM2Q8NEG5 633 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 CMASQ8NFW8 434 aaPredicted RBP12.91□□□□□ -0.34
TMEM56-202ENST00000455656 HPS3Q969F9 1004 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
TMEM56-202ENST00000455656 C7orf25Q9BPX7 421 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
TMEM56-202ENST00000455656 PANK4Q9NVE7 773 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 MTRRQ9UBK8 725 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 TRIOO75962 3097 aa12.91□□□□□ -0.34
TMEM56-202ENST00000455656 MYO10Q9HD67 2058 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 PPEF2O14830 753 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 POLR2DO15514 142 aaKnown RBP12.9□□□□□ -0.34
TMEM56-202ENST00000455656 GLUD1P00367 558 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 SPATA31D3P0C874 917 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 CASP1P29466 404 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 RPL9P32969 192 aaKnown RBP12.9□□□□□ -0.34
TMEM56-202ENST00000455656 HOXD13P35453 343 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 MTHFRP42898 656 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.345e-8■■■■■ 27.1
TMEM56-202ENST00000455656 ME1P48163 572 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 ACOT2P49753 483 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 MRPL58Q14197 206 aaKnown RBP12.9□□□□□ -0.34
TMEM56-202ENST00000455656 KYAT1Q16773 422 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 SPATA31D4Q6ZUB0 917 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 EPM2AIP1Q7L775 607 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-202ENST00000455656 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 HDAC7Q8WUI4 952 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 LEO1Q8WVC0 666 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-202ENST00000455656 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 NECTIN4Q96NY8 510 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 FBXW11Q9UKB1 542 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
TMEM56-202ENST00000455656 TECTAO75443 2155 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 DCXO43602 365 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
TMEM56-202ENST00000455656 RFPL2O75678 378 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
TMEM56-202ENST00000455656 GCNT3O95395 438 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 NFICP08651 508 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 CYP3A5P20815 502 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
TMEM56-202ENST00000455656 CREMQ03060 361 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 PPP2R3AQ06190 1150 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 CES5AQ6NT32 575 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 CCDC65Q8IXS2 484 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 SUSD3Q96L08 255 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
TMEM56-202ENST00000455656 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 MUTYHQ9UIF7 546 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
TMEM56-202ENST00000455656 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
TMEM56-202ENST00000455656 BACE2Q9Y5Z0 518 aa12.89□□□□□ -0.35
TMEM56-202ENST00000455656 FAM237AA0A1B0GTK4 181 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 CCDC195A0A1B0GUA6 201 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 C2CD4DB7Z1M9 353 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 M0QZQ0 153 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 KLRC4O43908 158 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 GPR37L1O60883 481 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
TMEM56-202ENST00000455656 ZMYND10O75800 440 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
TMEM56-202ENST00000455656 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
TMEM56-202ENST00000455656 ALCAMQ13740 583 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 RAB33AQ14088 237 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
TMEM56-202ENST00000455656 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 SLFN12LQ6IEE8 588 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 CD302Q8IX05 232 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 ACCSQ96QU6 501 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 PLEKHA4Q9H4M7 779 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
TMEM56-202ENST00000455656 A0A1B0GVL5 298 aa12.87□□□□□ -0.35
TMEM56-202ENST00000455656 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
TMEM56-202ENST00000455656 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms