RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 RPS6KC1Q96S38 1066 aa7.34□□□□□ -1.23
ECHDC1-210ENST00000454859 FDXACB1Q9BRP7 624 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-210ENST00000454859 PDE11AQ9HCR9 933 aa7.34□□□□□ -1.23
ECHDC1-210ENST00000454859 FRMPD3Q5JV73 1810 aa7.34□□□□□ -1.23
ECHDC1-210ENST00000454859 MED7O43513 233 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CLSTN1O94985 981 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 PLEKP08567 350 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 MYL3P08590 195 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 KCNE1P15382 129 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP11B1P15538 503 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ATF7P17544 494 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ARF4P18085 180 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP2C19P33261 490 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 FLT3LGP49771 235 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 SNX16P57768 344 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 NOP14P78316 857 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 GPC5P78333 572 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 RBP5P82980 135 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ENOX2Q16206 610 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 GLE1Q53GS7 698 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 FAM26DQ5JW98 314 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 TRMT1LQ7Z2T5 733 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 RNF180Q86T96 592 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ARHGEF19Q8IW93 802 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 MSANTD4Q8NCY6 345 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 GOLGA1Q92805 767 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 NAP1L3Q99457 506 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 BCO2Q9BYV7 579 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 IKZF4Q9H2S9 585 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 GTF3C4Q9UKN8 822 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 SNX12Q9UMY4 172 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 PCDHGC3Q9UN70 934 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 VNN1O95497 513 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 HSPA6P17066 643 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CDH5P33151 784 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 RAB27AP51159 221 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 IGBP1P78318 339 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP27A1Q02318 531 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ACAD10Q6JQN1 1059 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 SERINC5Q86VE9 423 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 TRIB2Q92519 343 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 UBXN4Q92575 508 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ZBTB45Q96K62 511 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 SCLT1Q96NL6 688 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 SELENOOQ9BVL4 669 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CELF4Q9BZC1 486 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 LHX5Q9H2C1 402 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 UBN1Q9NPG3 1134 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 SETD4Q9NVD3 440 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 ARGLU1Q9NWB6 273 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 CNTN3Q9P232 1028 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 TTC7AQ9ULT0 858 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 TRPV2Q9Y5S1 764 aa7.33□□□□□ -1.24
ECHDC1-210ENST00000454859 TRIP12Q14669 1992 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TARSL2A2RTX5 802 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CTAGE15A4D2H0 777 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ADCY6O43306 1168 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ATP8B1O43520 1251 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TADA3O75528 432 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CYP1A2P05177 515 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CTAGE8P0CG41 777 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ACO1P21399 889 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 SLC1A1P43005 524 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 PAFAH1B1P43034 410 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 GSCP56915 257 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 MRPS6P82932 125 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 MYO1EQ12965 1108 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 PTK7Q13308 1070 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TMEM132DQ14C87 1099 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 SNX17Q15036 470 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CCL14Q16627 93 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ARHGAP44Q17R89 818 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 GNASQ5JWF2 1037 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 GJC2Q5T442 439 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 LIN9Q5TKA1 542 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 RSRC2Q7L4I2 434 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CATSPER4Q7RTX7 472 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CTAGE6Q86UF2 777 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 PHF13Q86YI8 300 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CTAGE4Q8IX94 777 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 EIF1ADQ8N9N8 165 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 U2AF1L4Q8WU68 220 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 TRAPPC12Q8WVT3 735 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 DDX1Q92499 740 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ANKRD7Q92527 254 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 NCAPGQ9BPX3 1015 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 PLVAPQ9BX97 442 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 MRPL47Q9HD33 250 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 SLC38A7Q9NVC3 462 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 CEP83Q9Y592 693 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 ARHGEF37A1IGU5 675 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 RCCD1A6NED2 376 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 GPR25O00155 361 aa7.32□□□□□ -1.24
ECHDC1-210ENST00000454859 GPR182O15218 404 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms