RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 TRPC3Q13507 836 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 CUL2Q13617 745 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 PTPN14Q15678 1187 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 SGSM1Q2NKQ1 1148 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 FBXO47Q5MNV8 452 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 SPOPLQ6IQ16 392 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 ALKAL1Q6UXT8 129 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 C1orf127Q8N9H9 656 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 TAF4BQ92750 862 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 ELMO3Q96BJ8 720 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 DEFB118Q96PH6 123 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 IMPG2Q9BZV3 1241 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 TRIM6Q9C030 488 aaPredicted RBP12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 XYLT2Q9H1B5 865 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 NXF3Q9H4D5 531 aaKnown RBP12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 AGO3Q9H9G7 860 aaKnown RBP12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 SIX4Q9UIU6 781 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 NENFQ9UMX5 172 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 PCDHA13Q9Y5I0 950 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 SQORQ9Y6N5 450 aa12.09□□□□□ -0.47
NDUFA3-209ENST00000451517 A0A087X0T9 212 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 GPR182O15218 404 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 OFD1O75665 1012 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 RECQL4O94761 1208 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 FAM228BP0C875 321 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 HSPA8P11142 646 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 TNNT1P13805 278 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 TBXAS1P24557 533 aaPredicted RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 YARSP54577 528 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 MYL6P60660 151 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 CYP27A1Q02318 531 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 BMS1Q14692 1282 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 LPIN1Q14693 890 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 ZBTB6Q15916 424 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 XKR4Q5GH76 650 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 ZNF618Q5T7W0 954 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 TWF2Q6IBS0 349 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 CTU1Q7Z7A3 348 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 VPS36Q86VN1 386 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 UBR7Q8N806 425 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 SMG8Q8ND04 991 aaKnown RBP12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 TSPAN18Q96SJ8 248 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 RNF208Q9H0X6 261 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 CNTN3Q9P232 1028 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 HES2Q9Y543 173 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 IPPQ9Y573 584 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 RALGAPA2Q2PPJ7 1873 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 ATP8B3O60423 1300 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
NDUFA3-209ENST00000451517 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 DDX3XO00571 662 aaKnown RBP eCLIP12.07□□□□□ -0.488e-11■■■■■ 27.1
NDUFA3-209ENST00000451517 PJA2O43164 708 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 STAU1O95793 577 aaKnown RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 GHRP10912 638 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 CKBP12277 381 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 KCNE1P15382 129 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ATICP31939 592 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 MAGEA1P43355 309 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 NFX1Q12986 1120 aaKnown RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 PAK2Q13177 524 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 DSC3Q14574 896 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ZNF699Q32M78 642 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ARHGAP29Q52LW3 1261 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 C10orf76Q5T2E6 689 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 FBXO46Q6PJ61 603 aaPredicted RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 KIAA1328Q86T90 577 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 SLC30A5Q8TAD4 765 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 LNX1Q8TBB1 728 aaPredicted RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ZMAT2Q96NC0 199 aaKnown RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ARID3AQ99856 593 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 TRAIPQ9BWF2 469 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 IFIH1Q9BYX4 1025 aaKnown RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 NIF3L1Q9GZT8 377 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 CXCL16Q9H2A7 254 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 RNF39Q9H2S5 420 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 VRTNQ9H8Y1 702 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 NOCTQ9UK39 431 aaKnown RBP12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 ITGA11Q9UKX5 1188 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 PADI3Q9ULW8 664 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 CNTN6Q9UQ52 1028 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 PCDHB2Q9Y5E7 798 aa12.07□□□□□ -0.48
NDUFA3-209ENST00000451517 CYP26A1O43174 497 aa12.06□□□□□ -0.48
NDUFA3-209ENST00000451517 SGPL1O95470 568 aa12.06□□□□□ -0.48
NDUFA3-209ENST00000451517 ABL1P00519 1130 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms