RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 KCNG1Q9UIX4 513 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 TOM1L1O75674 476 aa29.66■■■□□ 2.34
USP42-204ENST00000451154 NBL1P41271 181 aa29.66■■■□□ 2.34
USP42-204ENST00000451154 SLC10A6Q3KNW5 377 aa29.66■■■□□ 2.34
USP42-204ENST00000451154 ARSHQ5FYA8 562 aa29.66■■■□□ 2.34
USP42-204ENST00000451154 VARS2Q5ST30 1063 aaKnown RBP29.66■■■□□ 2.34
USP42-204ENST00000451154 ARL6IP4Q66PJ3 421 aaKnown RBP29.66■■■□□ 2.34
USP42-204ENST00000451154 TBC1D17Q9HA65 648 aa29.66■■■□□ 2.34
USP42-204ENST00000451154 RPL9P32969 192 aaKnown RBP29.65■■■□□ 2.34
USP42-204ENST00000451154 GPC5P78333 572 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 NOLC1Q14978 699 aaKnown RBP eCLIP29.65■■■□□ 2.34
USP42-204ENST00000451154 TMEM119Q4V9L6 283 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 ASCL5Q7RTU5 278 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 FRMD5Q7Z6J6 570 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 KCTD17Q8N5Z5 321 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 SLC2A4RGQ9NR83 387 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 SMC3Q9UQE7 1217 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 NUB1Q9Y5A7 615 aa29.65■■■□□ 2.34
USP42-204ENST00000451154 POU2F2P09086 479 aa29.64■■■□□ 2.34
USP42-204ENST00000451154 ARPP19P56211 112 aa29.64■■■□□ 2.34
USP42-204ENST00000451154 PABPC1LQ4VXU2 614 aaKnown RBP29.64■■■□□ 2.34
USP42-204ENST00000451154 ZNF461Q8TAF7 563 aa29.64■■■□□ 2.34
USP42-204ENST00000451154 MATR3P43243 847 aaKnown RBP eCLIP29.63■■■□□ 2.33
USP42-204ENST00000451154 ROR1Q01973 937 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 ANGPT1Q15389 498 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 LARP1BQ659C4 914 aaKnown RBP29.63■■■□□ 2.33
USP42-204ENST00000451154 SLC8B1Q6J4K2 584 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 RTL10Q7L3V2 364 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 TMEM130Q8N3G9 435 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 ARHGEF3Q9NR81 526 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 KCND2Q9NZV8 630 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 FAM186AA6NE01 2351 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 MYH15Q9Y2K3 1946 aa29.63■■■□□ 2.33
USP42-204ENST00000451154 CLDN3O15551 220 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 TBC1D4O60343 1298 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 ABLIM3O94929 683 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 ELF1P32519 619 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 MRPL58Q14197 206 aaKnown RBP29.62■■■□□ 2.33
USP42-204ENST00000451154 DHX8Q14562 1220 aaKnown RBP29.62■■■□□ 2.33
USP42-204ENST00000451154 ZPBP2Q6X784 338 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 ING5Q8WYH8 240 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 HAPLN2Q9GZV7 340 aa29.62■■■□□ 2.33
USP42-204ENST00000451154 UPF2Q9HAU5 1272 aaKnown RBP29.62■■■□□ 2.33
USP42-204ENST00000451154 WDR27A2RRH5 827 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 SYN3O14994 580 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 MCM2P49736 904 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 SPAG1Q07617 926 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 MCL1Q07820 350 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 SPECC1Q5M775 1068 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 PHLDB3Q6NSJ2 640 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 MTSS1LQ765P7 747 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 LRRC15Q8TF66 581 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 LARSQ9P2J5 1176 aaKnown RBP29.61■■■□□ 2.33
USP42-204ENST00000451154 FBXL5Q9UKA1 691 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 KCNH3Q9ULD8 1083 aa29.61■■■□□ 2.33
USP42-204ENST00000451154 MRPS23Q9Y3D9 190 aaKnown RBP29.61■■■□□ 2.33
USP42-204ENST00000451154 H7C4K7 107 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 PRRG1O14668 218 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 DCNP07585 359 aaKnown RBP29.6■■■□□ 2.33
USP42-204ENST00000451154 RHOP08100 348 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 CXCL8P10145 99 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 HAUS6Q7Z4H7 955 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 NPAS3Q8IXF0 933 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 BICD1Q96G01 975 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 SUSD3Q96L08 255 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 AK8Q96MA6 479 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 TBC1D32Q96NH3 1257 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 TUBGCP4Q9UGJ1 667 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 SIT1Q9Y3P8 196 aa29.6■■■□□ 2.33
USP42-204ENST00000451154 PDCD11Q14690 1871 aaKnown RBP29.59■■■□□ 2.33
USP42-204ENST00000451154 ARHGEF37A1IGU5 675 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 PRR23AA6NEV1 266 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 SEC24AO95486 1093 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 MCM4P33991 863 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 UBA7P41226 1012 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 NCKAP1LP55160 1127 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 SLC5A9Q2M3M2 681 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 CTXN3Q4LDR2 81 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 GPBP1Q86WP2 473 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 MCRS1Q96EZ8 462 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 CALML4Q96GE6 196 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 KXD1Q9BQD3 176 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 REEP2Q9BRK0 252 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 CYP4F11Q9HBI6 524 aa29.59■■■□□ 2.33
USP42-204ENST00000451154 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.59■■■□□ 2.33
USP42-204ENST00000451154 LRG1P02750 347 aa29.58■■■□□ 2.33
USP42-204ENST00000451154 ATF2P15336 505 aa29.58■■■□□ 2.33
USP42-204ENST00000451154 PTPN2P17706 415 aa29.58■■■□□ 2.33
USP42-204ENST00000451154 GRIN1Q05586 938 aa29.58■■■□□ 2.33
USP42-204ENST00000451154 SNW1Q13573 536 aaKnown RBP29.58■■■□□ 2.33
USP42-204ENST00000451154 DDX12PQ92771 950 aa29.58■■■□□ 2.33
USP42-204ENST00000451154 FOXQ1Q9C009 403 aa29.58■■■□□ 2.33
USP42-204ENST00000451154 H0YCG3 227 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 CLTAP09496 248 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 TNFSF9P41273 254 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 MCM6Q14566 821 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 POTEHQ6S545 545 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 TCEAL8Q8IYN2 117 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 MYCT1Q8N699 235 aa29.57■■■□□ 2.32
USP42-204ENST00000451154 NKD2Q969F2 451 aaPredicted RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms