RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 CUL4AQ13619 759 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 PABPC1LQ4VXU2 614 aaKnown RBP18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SPECC1Q5M775 1068 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 VARS2Q5ST30 1063 aaKnown RBP18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 HYIQ5T013 277 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ZNF461Q8TAF7 563 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SPIRE2Q8WWL2 714 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 NKD2Q969F2 451 aaPredicted RBP18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SLC2A4RGQ9NR83 387 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CITO14578 2027 aa18.13■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MYH11P35749 1972 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 NPHP3-ACAD11A0A0J9YXS1 232 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 PRR23AA6NEV1 266 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MEFVO15553 781 aaPredicted RBP18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 TOM1L1O75674 476 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 DCNP07585 359 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 PLA2G4BP0C869 781 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ELF1P32519 619 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MATR3P43243 847 aaKnown RBP eCLIP18.12■□□□□ 0.493e-8■□□□□ 9.7
RAB11FIP3-204ENST00000449879 SLC12A3P55017 1021 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ROR1Q01973 937 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 PHLDB3Q6NSJ2 640 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MTSS1LQ765P7 747 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 RTL10Q7L3V2 364 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 TMEM161BQ8NDZ6 487 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ING5Q8WYH8 240 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CNTN3Q9P232 1028 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MRPS23Q9Y3D9 190 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SIT1Q9Y3P8 196 aa18.12■□□□□ 0.49
RAB11FIP3-204ENST00000449879 NOTCH4Q99466 2003 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 K7ELQ4 463 aaPredicted RBP18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 PRRG1O14668 218 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CLDN3O15551 220 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 POU2F2P09086 479 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MAPTP10636 758 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SNW1Q13573 536 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SLC10A6Q3KNW5 377 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ARL6IP4Q66PJ3 421 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SLC8B1Q6J4K2 584 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 KCTD17Q8N5Z5 321 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 KXD1Q9BQD3 176 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 KCNH3Q9ULD8 1083 aa18.11■□□□□ 0.49
RAB11FIP3-204ENST00000449879 WDR27A2RRH5 827 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 H7C4K7 107 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SYN3O14994 580 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ABLIM3O94929 683 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 LRG1P02750 347 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 RHOP08100 348 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 PTPN2P17706 415 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MCM4P33991 863 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 DHX8Q14562 1220 aaKnown RBP18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ZPBP2Q6X784 338 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 NPAS3Q8IXF0 933 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MCRS1Q96EZ8 462 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SHDQ96IW2 340 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 FOXQ1Q9C009 403 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CYP4F11Q9HBI6 524 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 KCND2Q9NZV8 630 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 LARSQ9P2J5 1176 aaKnown RBP18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CACNA1IQ9P0X4 2223 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 TBC1D4O60343 1298 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ATF2P15336 505 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SPAG1Q07617 926 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CTXN3Q4LDR2 81 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 TMEM119Q4V9L6 283 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ARSHQ5FYA8 562 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 LARP1BQ659C4 914 aaKnown RBP18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 SNX21Q969T3 373 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 BICD1Q96G01 975 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 FBXL5Q9UKA1 691 aa18.09■□□□□ 0.49
RAB11FIP3-204ENST00000449879 CFAP54Q96N23 3096 aa18.08■□□□□ 0.49
RAB11FIP3-204ENST00000449879 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 SEC24AO95486 1093 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 CXCL8P10145 99 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 UBA7P41226 1012 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 STARD6P59095 220 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 MCL1Q07820 350 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 MRPL58Q14197 206 aaKnown RBP18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 SLC5A9Q2M3M2 681 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 SLC44A4Q53GD3 710 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 HAUS6Q7Z4H7 955 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 TCEAL8Q8IYN2 117 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 APPL2Q8NEU8 664 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 CALML4Q96GE6 196 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 SUSD3Q96L08 255 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 CORO1BQ9BR76 489 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 HAPLN2Q9GZV7 340 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 TUBGCP4Q9UGJ1 667 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 MYO15AQ9UKN7 3530 aa18.08■□□□□ 0.48
RAB11FIP3-204ENST00000449879 EP300Q09472 2414 aaPredicted RBP18.07■□□□□ 0.48
RAB11FIP3-204ENST00000449879 H0YCG3 227 aa18.07■□□□□ 0.48
RAB11FIP3-204ENST00000449879 LRRN2O75325 713 aa18.07■□□□□ 0.48
RAB11FIP3-204ENST00000449879 CLTAP09496 248 aa18.07■□□□□ 0.48
RAB11FIP3-204ENST00000449879 ZNF280DQ6N043 979 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms