RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 NOP14P78316 857 aaKnown RBP10.41□□□□□ -0.74
RFC4-210ENST00000449502 PTK2Q05397 1052 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 MGAT3Q09327 533 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 MYO1EQ12965 1108 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 CUL2Q13617 745 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 ZNF667Q5HYK9 610 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 FAM26DQ5JW98 314 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 FBXO47Q5MNV8 452 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 C10orf76Q5T2E6 689 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
RFC4-210ENST00000449502 EFCAB13Q8IY85 973 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 TMEM192Q8IY95 271 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 SLC43A3Q8NBI5 491 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 HELQQ8TDG4 1101 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 ZNF592Q92610 1267 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 TATDN2Q93075 761 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 WNT8BQ93098 351 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 JAKMIP2Q96AA8 810 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 PGBD4Q96DM1 585 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 SNX27Q96L92 541 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 RPS6KC1Q96S38 1066 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 IFIH1Q9BYX4 1025 aaKnown RBP10.41□□□□□ -0.74
RFC4-210ENST00000449502 DNAI2Q9GZS0 605 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 NXF3Q9H4D5 531 aaKnown RBP10.41□□□□□ -0.74
RFC4-210ENST00000449502 LZTFL1Q9NQ48 299 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 DPP3Q9NY33 737 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 AJAP1Q9UKB5 411 aaPredicted RBP10.41□□□□□ -0.74
RFC4-210ENST00000449502 ITGA11Q9UKX5 1188 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 OGDHLQ9ULD0 1010 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 PCDHB4Q9Y5E5 795 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 PCDHB2Q9Y5E7 798 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 PCDHA13Q9Y5I0 950 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.41□□□□□ -0.74
RFC4-210ENST00000449502 SQORQ9Y6N5 450 aa10.41□□□□□ -0.74
RFC4-210ENST00000449502 ARID2Q68CP9 1835 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 PTPRJQ12913 1337 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 USP27XA6NNY8 438 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 CYP26A1O43174 497 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 PQBP1O60828 265 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 VNN1O95497 513 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 CD4P01730 458 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 PNMA6AP0CW24 399 aaPredicted RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 HSPA8P11142 646 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 CKBP12277 381 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 AKAP5P24588 427 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 POLR2BP30876 1174 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 CD52P31358 61 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 VAV2P52735 878 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 NAP1L1P55209 391 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 MYL6P60660 151 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 TNNC1P63316 161 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 GFPT1Q06210 699 aaPredicted RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 SLC18A3Q16572 532 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 CCDC122Q5T0U0 273 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 ZNF618Q5T7W0 954 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 HGSNATQ68CP4 663 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 SPOPLQ6IQ16 392 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 IRF2BP2Q7Z5L9 587 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 FAM84AQ96KN4 292 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 AGPAT1Q99943 283 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 ERVK-5Q9HDB9 667 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 FAM105AQ9NUU6 356 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 KLK14Q9P0G3 267 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 ADAMTS1Q9UHI8 967 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 PUF60Q9UHX1 559 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 PADI3Q9ULW8 664 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 UBQLN1Q9UMX0 589 aaKnown RBP10.4□□□□□ -0.74
RFC4-210ENST00000449502 AGAP1Q9UPQ3 857 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 HES2Q9Y543 173 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 IPPQ9Y573 584 aa10.4□□□□□ -0.74
RFC4-210ENST00000449502 MYH9P35579 1960 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 DCDC2CA8MYV0 355 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 SGPL1O95470 568 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 ASS1P00966 412 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 CST3P01034 146 aaPredicted RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 ITGB3P05106 788 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 SELPP16109 830 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 CASQ1P31415 396 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 LBX1P52954 281 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 GNG11P61952 73 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 BMS1Q14692 1282 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 LPIN1Q14693 890 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 UBXN11Q5T124 520 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 LRRC8DQ7L1W4 858 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 ZNF571Q7Z3V5 609 aaPredicted RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 REXO1L1PQ8IX06 675 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 FAM71AQ8IYT1 594 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 RPUSD2Q8IZ73 545 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 TTC39CQ8N584 583 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 DNAJC5GQ8N7S2 189 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 C1orf127Q8N9H9 656 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 RNF169Q8NCN4 708 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 KIF18AQ8NI77 898 aa10.39□□□□□ -0.75
RFC4-210ENST00000449502 U2AF1L4Q8WU68 220 aaKnown RBP10.39□□□□□ -0.75
RFC4-210ENST00000449502 SHC3Q92529 594 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms