RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 EHHADHQ08426 723 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 SLFN12LQ6IEE8 588 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 CES5AQ6NT32 575 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 SPATA31D4Q6ZUB0 917 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 ZNF707Q96C28 371 aaPredicted RBP15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 RPGRIP1Q96KN7 1286 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 NECTIN4Q96NY8 510 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 C7orf25Q9BPX7 421 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 MSTO1Q9BUK6 570 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 C1QTNF1Q9BXJ1 281 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 PCDHB13Q9Y5F0 798 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 BACE2Q9Y5Z0 518 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 TECTAO75443 2155 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 POLR2DO15514 142 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 TRAPPC3O43617 180 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 GPR37L1O60883 481 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 MYBP10242 640 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 IDEP14735 1019 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 TKTP29401 623 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 ME1P48163 572 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 CREMQ03060 361 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 RAB33AQ14088 237 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 PSMD5Q16401 504 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 C15orf39Q6ZRI6 1047 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 CEP57Q86XR8 500 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 CD302Q8IX05 232 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 GLIS3Q8NEA6 775 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 ZSWIM2Q8NEG5 633 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 DHX58Q96C10 678 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 SUSD3Q96L08 255 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 RIPOR3Q96MK2 946 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 ACCSQ96QU6 501 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 SFXN1Q9H9B4 322 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 RPF1Q9H9Y2 349 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 MAN1C1Q9NR34 630 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 MTRRQ9UBK8 725 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 TUBGCP4Q9UGJ1 667 aa15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 AGO2Q9UKV8 859 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-204ENST00000449062 CITO14578 2027 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 FAM237AA0A1B0GTK4 181 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 DCXO43602 365 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 RFPL2O75678 378 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 ALADP13716 330 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 CMA1P23946 247 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 MATR3P43243 847 aaKnown RBP eCLIP15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 AARSP49588 968 aaKnown RBP eCLIP15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 ACOT2P49753 483 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 POSTNQ15063 836 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 SPATA1Q5VX52 437 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 PDXDC1Q6P996 788 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 CYP26C1Q6V0L0 522 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 EPM2AIP1Q7L775 607 aaPredicted RBP15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 KREMEN2Q8NCW0 462 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 HPS3Q969F9 1004 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 LRRC27Q9C0I9 530 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 KCNH3Q9ULD8 1083 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 UBQLN1Q9UMX0 589 aaKnown RBP15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 VWA8A3KMH1 1905 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 MYO10Q9HD67 2058 aa15.31■□□□□ 0.04
RTFDC1-204ENST00000449062 CCDC195A0A1B0GUA6 201 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 M0QZQ0 153 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 SYN3O14994 580 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 ZMYND10O75800 440 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 PRPF6O94906 941 aaKnown RBP15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 OR1D2P34982 312 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 GUCY2FP51841 1108 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 AMPD3Q01432 767 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 ALCAMQ13740 583 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 SLC8B1Q6J4K2 584 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 CCDC65Q8IXS2 484 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 ZNF507Q8TCN5 953 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 KIF12Q96FN5 646 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 LRFN3Q9BTN0 628 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 ASB7Q9H672 318 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 DPP7Q9UHL4 492 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 MUTYHQ9UIF7 546 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 HPSEQ9Y251 543 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 USTQ9Y2C2 406 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 DERAQ9Y315 318 aa15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-204ENST00000449062 MUC6Q6W4X9 2439 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 MYH15Q9Y2K3 1946 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 ANO9A1A5B4 782 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 C2CD4DB7Z1M9 353 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 PIRO00625 290 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 PPEF2O14830 753 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 ACTN4O43707 911 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 ABLIM3O94929 683 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 GCNT3O95395 438 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 SLFN14P0C7P3 912 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 GARTP22102 1010 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 CASP1P29466 404 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 WNT7BP56706 349 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms