RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 KREMEN2Q8NCW0 462 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 C18orf25Q96B23 403 aaPredicted RBP20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 RPF1Q9H9Y2 349 aaKnown RBP20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 KBTBD4Q9NVX7 518 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 FBXW11Q9UKB1 542 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 CPSF3Q9UKF6 684 aaKnown RBP20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 UBQLN1Q9UMX0 589 aaKnown RBP20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 EXOC7Q9UPT5 735 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 NUB1Q9Y5A7 615 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 MYH15Q9Y2K3 1946 aa20.51■□□□□ 0.87
ATPAF2-201ENST00000444058 C2CD4DB7Z1M9 353 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 XPOTO43592 962 aaKnown RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 ZMYND10O75800 440 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 LRPAP1P30533 357 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 TNFSF9P41273 254 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 POSTNQ15063 836 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 ENOX2Q16206 610 aaKnown RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 PTPN21Q16825 1174 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 AXDND1Q5T1B0 1012 aaPredicted RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 FOXD4L5Q5VV16 416 aaPredicted RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 SHC4Q6S5L8 630 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 OTOP3Q7RTS5 596 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 IQUBQ8NA54 791 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 TDRD5Q8NAT2 981 aaKnown RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 FOXD4L4Q8WXT5 416 aaPredicted RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 ZNF707Q96C28 371 aaPredicted RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 PRKD2Q9BZL6 878 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 WDR6Q9NNW5 1121 aaKnown RBP20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 TSHZ2Q9NRE2 1034 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 PCDHB13Q9Y5F0 798 aa20.5■□□□□ 0.87
ATPAF2-201ENST00000444058 FAM86C2PA6NEL3 165 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 ANKRD63C9JTQ0 380 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 RFPL2O75678 378 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 HNRNPA1P09651 372 aaKnown RBP eCLIP20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 SPATA31D3P0C874 917 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 TKTP29401 623 aaKnown RBP20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 BRCC3P46736 316 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 ZXDAP98168 799 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 AMPD3Q01432 767 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 PKP1Q13835 747 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 UVSSAQ2YD98 709 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 ADALQ6DHV7 355 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 CNNM4Q6P4Q7 775 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 SPATA31D4Q6ZUB0 917 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 GLYCTKQ8IVS8 523 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 STAMQ92783 540 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 ACSF2Q96CM8 615 aaPredicted RBP20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 SUSD3Q96L08 255 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 ASB7Q9H672 318 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 PANK4Q9NVE7 773 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 DERAQ9Y315 318 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 PLXNA3P51805 1871 aa20.49■□□□□ 0.87
ATPAF2-201ENST00000444058 LACTBL1A8MY62 500 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 IDEP14735 1019 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 PAX3P23760 479 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 HOXA9P31269 272 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 OR1D2P34982 312 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 MRPL58Q14197 206 aaKnown RBP20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 ZBTB41Q5SVQ8 909 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 LIN9Q5TKA1 542 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 SLC8B1Q6J4K2 584 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 TRIM67Q6ZTA4 783 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 CCDC65Q8IXS2 484 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 SMG7Q92540 1137 aaKnown RBP20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 KIF12Q96FN5 646 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 ACCSQ96QU6 501 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 MAGEF1Q9HAY2 307 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 TUBGCP4Q9UGJ1 667 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 RCOR1Q9UKL0 485 aa20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 AGO2Q9UKV8 859 aaKnown RBP20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 ARIH1Q9Y4X5 557 aaPredicted RBP20.48■□□□□ 0.87
ATPAF2-201ENST00000444058 VWA8A3KMH1 1905 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 MTCL1Q9Y4B5 1905 aaKnown RBP20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 H7C4K7 107 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 I3L4J1 428 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 ADAM12O43184 909 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 POU2F2P09086 479 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 SP100P23497 879 aaPredicted RBP20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 ME1P48163 572 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 VARS2Q5ST30 1063 aaKnown RBP20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 BMP8AQ7Z5Y6 402 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 APPL2Q8NEU8 664 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 FEZF2Q8TBJ5 459 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 PCDHA7Q9UN72 937 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 SORCS3Q9UPU3 1222 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 CDY1Q9Y6F8 540 aa20.47■□□□□ 0.87
ATPAF2-201ENST00000444058 PDCD11Q14690 1871 aaKnown RBP20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 DENND4AQ7Z401 1863 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 M0QZQ0 153 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 TBC1D4O60343 1298 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 GCNT3O95395 438 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 ADSSP30520 456 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 MCM4P33991 863 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 AARSP49588 968 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 DNM1Q05193 864 aaKnown RBP20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 SIGLEC14Q08ET2 396 aa20.46■□□□□ 0.87
ATPAF2-201ENST00000444058 SPATA1Q5VX52 437 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms