RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZHX3Q9H4I2 956 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 LIMD1Q9UGP4 676 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 SORCS3Q9UPU3 1222 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 BACE2Q9Y5Z0 518 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 SCN1AP35498 2009 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 A0A0B4J269 797 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 TRAPPC3O43617 180 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 PPP1R37O75864 691 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 ABCD1P33897 745 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 TXLNAP40222 546 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZC2HC1CQ53FD0 456 aaPredicted RBP20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 OTOP3Q7RTS5 596 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZNF720Q7Z2F6 126 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 SFR1Q86XK3 245 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 HSCBQ8IWL3 235 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 TMEM130Q8N3G9 435 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 SMG7Q92540 1137 aaKnown RBP20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 TUBGCP4Q9UGJ1 667 aa20.63■□□□□ 0.89
HMGB3P22-201ENST00000442010 CLUHO75153 1309 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 ANKRD63C9JTQ0 380 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 OGTO15294 1046 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 TBC1D4O60343 1298 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 PPP6R2O75170 966 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 ASGR2P07307 311 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 OR1D2P34982 312 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 MATR3P43243 847 aaKnown RBP eCLIP20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 ENOX2Q16206 610 aaKnown RBP20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 KYAT1Q16773 422 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 CCDC73Q6ZRK6 1079 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 ANKS3Q6ZW76 656 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 SV2BQ7L1I2 683 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 ACSF2Q96CM8 615 aaPredicted RBP20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 STYXL1Q9Y6J8 313 aa20.62■□□□□ 0.89
HMGB3P22-201ENST00000442010 FRMD3A2A2Y4 597 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 LACTBL1A8MY62 500 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 SYN3O14994 580 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 SPTLC2O15270 562 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 LRPAP1P30533 357 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 SPAG1Q07617 926 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 MTMR3Q13615 1198 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 MRPL58Q14197 206 aaKnown RBP20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 STK38Q15208 465 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 PANK2Q9BZ23 570 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 SMOC2Q9H3U7 446 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 TFIP11Q9UBB9 837 aaKnown RBP20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 CPSF3Q9UKF6 684 aaKnown RBP20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 CDY1Q9Y6F8 540 aa20.61■□□□□ 0.89
HMGB3P22-201ENST00000442010 TISP43B9A030 160 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 PDIA4P13667 645 aaKnown RBP20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 CYP3A5P20815 502 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 HOXA9P31269 272 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 VARS2Q5ST30 1063 aaKnown RBP20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 SLC8B1Q6J4K2 584 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 UBALD2Q8IYN6 164 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 PBXIP1Q96AQ6 731 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 HVCN1Q96D96 273 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 SUSD3Q96L08 255 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 MFSD14AQ96MC6 490 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZNF396Q96N95 335 aaPredicted RBP20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 MSTO1Q9BUK6 570 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 IKZF4Q9H2S9 585 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 SEL1LQ9UBV2 794 aa20.6■□□□□ 0.89
HMGB3P22-201ENST00000442010 WDFY4Q6ZS81 3184 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 TCHHQ07283 1943 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 YEATS4O95619 227 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 C8AP07357 584 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 POU2F2P09086 479 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 HNRNPA1P09651 372 aaKnown RBP eCLIP20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZSCAN22P10073 491 aaPredicted RBP20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 GAP43P17677 238 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 STAT6P42226 847 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 E2F4Q16254 413 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 UVSSAQ2YD98 709 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 STAMQ92783 540 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 KIF12Q96FN5 646 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 MYADMQ96S97 322 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 TSPAN18Q96SJ8 248 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 RPF1Q9H9Y2 349 aaKnown RBP20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 EPS15L1Q9UBC2 864 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 UBQLN1Q9UMX0 589 aaKnown RBP20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 NUB1Q9Y5A7 615 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 TSC2P49815 1807 aa20.59■□□□□ 0.89
HMGB3P22-201ENST00000442010 ABLIM3O94929 683 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 F13A1P00488 732 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 ADSSP30520 456 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 PLA2G5P39877 138 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 AARSP49588 968 aaKnown RBP eCLIP20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 ROR1Q01973 937 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 KCNA1Q09470 495 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 PKP1Q13835 747 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 AXDND1Q5T1B0 1012 aaPredicted RBP20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 LIN9Q5TKA1 542 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 PDILTQ8N807 584 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 KCNK12Q9HB15 430 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 PIDD1Q9HB75 910 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 OLFML3Q9NRN5 406 aa20.58■□□□□ 0.89
HMGB3P22-201ENST00000442010 WDR27A2RRH5 827 aa20.57■□□□□ 0.88
HMGB3P22-201ENST00000442010 M0QZQ0 153 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms