RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 TRIM11Q96F44 468 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 AVENQ9NQS1 362 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-214ENST00000439122 PCDHB4Q9Y5E5 795 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 FAM107AO95990 144 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 FGFR4P22455 802 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 ARL2P36404 184 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 CENPCQ03188 943 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 DAB2IPQ5VWQ8 1189 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 CHST13Q8NET6 341 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 UHMK1Q8TAS1 419 aaKnown RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 C11orf70Q9BRQ4 267 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 APOBEC3GQ9HC16 384 aaKnown RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 CFHP08603 1231 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 ACO1P21399 889 aaKnown RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 UBA1P22314 1058 aaKnown RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 GNA15P30679 374 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 SLC1A1P43005 524 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-214ENST00000439122 CALCOCO2Q13137 446 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 TREML2Q5T2D2 321 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 CCDC25Q86WR0 208 aa12.94□□□□□ -0.34
HDAC8-214ENST00000439122 LCTP09848 1927 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 A0A0B4J269 797 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 GMNCA6NCL1 334 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 FSCN2O14926 492 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 PIGRP01833 764 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 CYP1A1P04798 512 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 EDN1P05305 212 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 KRT17Q04695 432 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 SLMAPQ14BN4 828 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 UBAP2Q5T6F2 1119 aaKnown RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 LIN9Q5TKA1 542 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 MON1BQ7L1V2 547 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 CCDC50Q8IVM0 306 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 ART4Q93070 314 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 NIFKQ9BYG3 293 aaKnown RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 ADAM22Q9P0K1 906 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 KIAA0754O94854 1291 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 EEPD1Q7L9B9 569 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC8-214ENST00000439122 TLCD1Q96CP7 247 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 CGRRF1Q99675 332 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 NRBP2Q9NSY0 501 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 GPRC5DQ9NZD1 345 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 ASIC3Q9UHC3 531 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 NUB1Q9Y5A7 615 aa12.93□□□□□ -0.34
HDAC8-214ENST00000439122 SSC5DA1L4H1 1573 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 A0A087WUV0 522 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 SRRM3A6NNA2 597 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 RGS16O15492 202 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 THAP12O43422 761 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 TRAPPC3O43617 180 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 CLTAP09496 248 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 RARGP13631 454 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 TBXAS1P24557 533 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 RFC5P40937 340 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 LIG3P49916 1009 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 STAT5BP51692 787 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 CDR1P51861 262 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 DRP2Q13474 957 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 NCOA4Q13772 614 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 CAPSQ13938 189 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 VGLL4Q14135 290 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 MICALCLQ6ZW33 695 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 TADA2BQ86TJ2 420 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 NCAPG2Q86XI2 1143 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 SPATS2Q86XZ4 545 aaKnown RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 ABRAQ8N0Z2 381 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 RBBP8NLQ8NC74 664 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-214ENST00000439122 MDM1Q8TC05 714 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 PCYT2Q99447 389 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 HEMGNQ9BXL5 484 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 MAF1Q9H063 256 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 AZI2Q9H6S1 392 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
HDAC8-214ENST00000439122 IGKV6D-21A0A0A0MT36 114 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 RIPK2O43353 540 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 ADCY3O60266 1144 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 PROSCO94903 275 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 SLCO1A2P46721 670 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms