RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 EPHX3Q9H6B9 360 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 SFXN1Q9H9B4 322 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
EXT1-202ENST00000436216 MAGEF1Q9HAY2 307 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 FAM13BQ9NYF5 915 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 DPP7Q9UHL4 492 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 CDH22Q9UJ99 828 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 VWA8A3KMH1 1905 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
EXT1-202ENST00000436216 MTCL1Q9Y4B5 1905 aaKnown RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 TGM5O43548 720 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 MYBP10242 640 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 RPL17P18621 184 aaKnown RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 CMA1P23946 247 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 LRPAP1P30533 357 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 BRCC3P46736 316 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 KRT85P78386 507 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 BECN1Q14457 450 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 POSTNQ15063 836 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 PSMD5Q16401 504 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 ATAT1Q5SQI0 421 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 ADALQ6DHV7 355 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 TMC5Q6UXY8 1006 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 RNF135Q8IUD6 432 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 RIPOR3Q96MK2 946 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 PYM1Q9BRP8 204 aaKnown RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 POMKQ9H5K3 350 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 MAN1C1Q9NR34 630 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 AGO2Q9UKV8 859 aaKnown RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
EXT1-202ENST00000436216 EXOC7Q9UPT5 735 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 BACE2Q9Y5Z0 518 aa13.49□□□□□ -0.25
EXT1-202ENST00000436216 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 I3L4J1 428 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 SYN3O14994 580 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 TBC1D4O60343 1298 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 GCNT3O95395 438 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 TKTP29401 623 aaKnown RBP13.48□□□□□ -0.25
EXT1-202ENST00000436216 AARSP49588 968 aaKnown RBP eCLIP13.48□□□□□ -0.25
EXT1-202ENST00000436216 EHHADHQ08426 723 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 RAB33AQ14088 237 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 MRPL58Q14197 206 aaKnown RBP13.48□□□□□ -0.25
EXT1-202ENST00000436216 SPATA1Q5VX52 437 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 PALB2Q86YC2 1186 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 FEZF2Q8TBJ5 459 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 CHAMP1Q96JM3 812 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 SUSD3Q96L08 255 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 ASB7Q9H672 318 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 DERAQ9Y315 318 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
EXT1-202ENST00000436216 ADAM12O43184 909 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 XPOTO43592 962 aaKnown RBP13.47□□□□□ -0.25
EXT1-202ENST00000436216 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
EXT1-202ENST00000436216 WEE2P0C1S8 567 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 SLFN14P0C7P3 912 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 ALADP13716 330 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 GARTP22102 1010 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 HOXD13P35453 343 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 ACOT2P49753 483 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 SPAG1Q07617 926 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 SLC8B1Q6J4K2 584 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 RSPO2Q6UXX9 243 aaPredicted RBP13.47□□□□□ -0.25
EXT1-202ENST00000436216 ANKS3Q6ZW76 656 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 UNC13DQ70J99 1090 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 EPM2AIP1Q7L775 607 aaPredicted RBP13.47□□□□□ -0.25
EXT1-202ENST00000436216 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 ZNF707Q96C28 371 aaPredicted RBP13.47□□□□□ -0.25
EXT1-202ENST00000436216 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 SPATA32Q96LK8 384 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
EXT1-202ENST00000436216 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 FBXW11Q9UKB1 542 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 USTQ9Y2C2 406 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 C2CD2Q9Y426 696 aa13.47□□□□□ -0.25
EXT1-202ENST00000436216 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 M0QZQ0 153 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 EIF3DO15371 548 aaKnown RBP eCLIP13.46□□□□□ -0.25
EXT1-202ENST00000436216 DCXO43602 365 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 GPR37L1O60883 481 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 RFPL2O75678 378 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
EXT1-202ENST00000436216 SPATA31D3P0C874 917 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 ASIC1P78348 528 aa13.46□□□□□ -0.25
EXT1-202ENST00000436216 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms