RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PRG3Q9Y2Y8 225 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-205ENST00000433439 DERAQ9Y315 318 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 C2CD2Q9Y426 696 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 GBF1Q92538 1859 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
CNOT9-205ENST00000433439 GCLMP48507 274 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 TPM4P67936 248 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 RAB30Q15771 203 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 DUOXA2Q1HG44 320 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 NT5DC4Q86YG4 428 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 COLGALT2Q8IYK4 626 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 PAAF1Q9BRP4 392 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 CWH43Q9H720 699 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 TAB2Q9NYJ8 693 aa16.59■□□□□ 0.25
CNOT9-205ENST00000433439 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
CNOT9-205ENST00000433439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.59■□□□□ 0.25
CNOT9-205ENST00000433439 PDCD11Q14690 1871 aaKnown RBP16.59■□□□□ 0.25
CNOT9-205ENST00000433439 ARHGEF15O94989 841 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 ALDH2P05091 517 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 ITGB3P05106 788 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 SLC11A1P49279 550 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 CLCNKBP51801 687 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 BCAR1P56945 870 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 PPP3CAQ08209 521 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 NAB2Q15742 525 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 ZBTB6Q15916 424 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 TCP11X2Q5H9J9 407 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 TRAPPC11Q7Z392 1133 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 TRIM59Q8IWR1 403 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
CNOT9-205ENST00000433439 HASPINQ8TF76 798 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 RSPH1Q8WYR4 309 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 ZNF558Q96NG5 402 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 TSPAN18Q96SJ8 248 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
CNOT9-205ENST00000433439 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 PODXLO00592 558 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 NRP1O14786 923 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 PPEF2O14830 753 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 STX10O60499 249 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 ATP1A3P13637 1013 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 LAG3P18627 525 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 DNAJB2P25686 324 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 POLR2BP30876 1174 aaKnown RBP16.57■□□□□ 0.24
CNOT9-205ENST00000433439 CTNNB1P35222 781 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 ALDH7A1P49419 539 aaKnown RBP16.57■□□□□ 0.24
CNOT9-205ENST00000433439 MARSP56192 900 aaKnown RBP16.57■□□□□ 0.24
CNOT9-205ENST00000433439 DSC1Q08554 894 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 TRPC3Q13507 836 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 CDKAL1Q5VV42 579 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 PPP2R2DQ66LE6 453 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 SCARA3Q6AZY7 606 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 KCNT2Q6UVM3 1135 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 SPRED2Q7Z698 418 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 C1orf127Q8N9H9 656 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 COLGALT1Q8NBJ5 622 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 SLC35C1Q96A29 364 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 TMEM175Q9BSA9 504 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 TUBGCP2Q9BSJ2 902 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 C17orf80Q9BSJ5 609 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 VPS16Q9H269 839 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 CERS4Q9HA82 394 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.57■□□□□ 0.241e-10■■■■■ 74.5
CNOT9-205ENST00000433439 AAASQ9NRG9 546 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 AGAP1Q9UPQ3 857 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
CNOT9-205ENST00000433439 A0A1W2PPC1 479 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 F8W810 466 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 B3GAT3O94766 335 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 C4BPAP04003 597 aaKnown RBP16.56■□□□□ 0.24
CNOT9-205ENST00000433439 GALTP07902 379 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 TPM2P07951 284 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 CYP3A5P20815 502 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 EEF1GP26641 437 aaKnown RBP16.56■□□□□ 0.24
CNOT9-205ENST00000433439 PIK3CAP42336 1068 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 MXI1P50539 228 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 AP3M2P53677 418 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 KRT31Q15323 416 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
CNOT9-205ENST00000433439 SV2AQ7L0J3 742 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 UROC1Q96N76 676 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 COLEC11Q9BWP8 271 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 HSD3B7Q9H2F3 369 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 SLC28A3Q9HAS3 691 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 NUB1Q9Y5A7 615 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 PCDHB12Q9Y5F1 795 aa16.56■□□□□ 0.24
CNOT9-205ENST00000433439 CSPG5O95196 566 aa16.55■□□□□ 0.24
CNOT9-205ENST00000433439 AFPP02771 609 aaKnown RBP16.55■□□□□ 0.24
CNOT9-205ENST00000433439 IGFBP6P24592 240 aaPredicted RBP16.55■□□□□ 0.24
CNOT9-205ENST00000433439 LRPAP1P30533 357 aa16.55■□□□□ 0.24
CNOT9-205ENST00000433439 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
CNOT9-205ENST00000433439 CLDN10P78369 228 aa16.55■□□□□ 0.24
CNOT9-205ENST00000433439 RBP5P82980 135 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms