RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ZBED4O75132 1171 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 VIMP08670 466 aaKnown RBP14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 ITGA8P53708 1063 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 BAATQ14032 418 aaPredicted RBP14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 TRIP13Q15645 432 aaPredicted RBP14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 C2CD6Q53TS8 623 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 LMBRD2Q68DH5 695 aaPredicted RBP14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 TAX1BP1Q86VP1 789 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 VSIG10LQ86VR7 867 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 GRK7Q8WTQ7 553 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 ATP6V0A1Q93050 837 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 GPRASP2Q96D09 838 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 TRIM11Q96F44 468 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 BICD1Q96G01 975 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 ELAC2Q9BQ52 826 aaKnown RBP14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 SAMD15Q9P1V8 674 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 R3HDM2Q9Y2K5 976 aaKnown RBP14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 DOCK5Q9H7D0 1870 aa14.19□□□□□ -0.14
SNRNP200-202ENST00000429650 DNAJC8O75937 253 aaPredicted RBP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 CYP1A1P04798 512 aaPredicted RBP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 CCND2P30279 289 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 SF3A3Q12874 501 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■■■□ 24.3
SNRNP200-202ENST00000429650 XRCC4Q13426 336 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 MTMR2Q13614 643 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 CYB5D1Q6P9G0 228 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 ARHGEF2Q92974 986 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 HOMER3Q9NSC5 361 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 ARHGAP28Q9P2N2 729 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 ZNRF3Q9ULT6 936 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 TELO2Q9Y4R8 837 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 DGAT1O75907 488 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 TTC4O95801 387 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 GAS8O95995 478 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 NR3C2P08235 984 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 KCNA2P16389 499 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 NSFP46459 744 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 RTP1P59025 263 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 CLDN10P78369 228 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 CENPCQ03188 943 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 DAB2IPQ5VWQ8 1189 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 XRRA1Q6P2D8 792 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 MON1BQ7L1V2 547 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 WNK4Q96J92 1243 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 TEPSINQ96N21 525 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 DNAJC17Q9NVM6 304 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 PARP14Q460N5 1801 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 UMODL1Q5DID0 1318 aa14.18□□□□□ -0.14
SNRNP200-202ENST00000429650 VWA5AO00534 786 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 EXTL3O43909 919 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 PROSCO94903 275 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 ATF2P15336 505 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 CREB1P16220 341 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 BPIFB4P59827 614 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 PTP4A2Q12974 167 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 KLF1Q13351 362 aaPredicted RBP14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 ZACNQ401N2 412 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 SWSAP1Q6NVH7 229 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 ATL2Q8NHH9 583 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 NSRP1Q9H0G5 558 aaKnown RBP14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 CD248Q9HCU0 757 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 O00370 1275 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 CHUKO15111 745 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 HLA-DRAP01903 254 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 RALAP11233 206 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 WNT7BP56706 349 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 CAV1Q03135 178 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 PSMD6Q15008 389 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 KYNUQ16719 465 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 WDR44Q5JSH3 913 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 VSTM1Q6UX27 236 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 PARP9Q8IXQ6 854 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 NIM1KQ8IY84 436 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 HEMGNQ9BXL5 484 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 POLR3FQ9H1D9 316 aaPredicted RBP14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 ATP6V0A4Q9HBG4 840 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 A1CFQ9NQ94 594 aaKnown RBP14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 CTNNAL1Q9UBT7 734 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 NEU2Q9Y3R4 380 aa14.17□□□□□ -0.14
SNRNP200-202ENST00000429650 TMEM120BA0PK00 339 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 SORBS3O60504 671 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 DKC1O60832 514 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 RGS20O76081 388 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 C4BPAP04003 597 aaKnown RBP14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 ADCY8P40145 1251 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 CXCL9Q07325 125 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 LRRC14Q15048 493 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 TDRD10Q5VZ19 366 aaKnown RBP14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 RINLQ6ZS11 566 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 CCDC60Q8IWA6 550 aaPredicted RBP14.16□□□□□ -0.14
SNRNP200-202ENST00000429650 IFT74Q96LB3 600 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms