RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
RCC1-208ENST00000429051 USTQ9Y2C2 406 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 VWA8A3KMH1 1905 aa12.54□□□□□ -0.4
RCC1-208ENST00000429051 C2orf16Q68DN1 1984 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 SYN3O14994 580 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
RCC1-208ENST00000429051 CYP3A5P20815 502 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 MCM4P33991 863 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 TNFSF9P41273 254 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 POU5F1Q01860 360 aaKnown RBP12.53□□□□□ -0.4
RCC1-208ENST00000429051 PKP1Q13835 747 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
RCC1-208ENST00000429051 SLC39A4Q6P5W5 647 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 LILRA6Q6PI73 481 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 OTOP3Q7RTS5 596 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 KREMEN2Q8NCW0 462 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 C3orf58Q8NDZ4 430 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 STAMQ92783 540 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 C18orf25Q96B23 403 aaPredicted RBP12.53□□□□□ -0.4
RCC1-208ENST00000429051 DHX58Q96C10 678 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 CLSTN3Q9BQT9 956 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 TMEM206Q9H813 350 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 CPSF3Q9UKF6 684 aaKnown RBP12.53□□□□□ -0.4
RCC1-208ENST00000429051 AGO2Q9UKV8 859 aaKnown RBP12.53□□□□□ -0.4
RCC1-208ENST00000429051 TRIOO75962 3097 aa12.53□□□□□ -0.4
RCC1-208ENST00000429051 LACTBL1A8MY62 500 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 PRR33A8MZF0 331 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 H7C4K7 107 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 FAM189A1O60320 539 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 PPP1R37O75864 691 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
RCC1-208ENST00000429051 PAX3P23760 479 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 TKTP29401 623 aaKnown RBP12.52□□□□□ -0.41
RCC1-208ENST00000429051 OR1D2P34982 312 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 BRCC3P46736 316 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 KRT85P78386 507 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 DNM1Q05193 864 aaKnown RBP12.52□□□□□ -0.41
RCC1-208ENST00000429051 ENOX2Q16206 610 aaKnown RBP12.52□□□□□ -0.41
RCC1-208ENST00000429051 E2F4Q16254 413 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 AXDND1Q5T1B0 1012 aaPredicted RBP12.52□□□□□ -0.41
RCC1-208ENST00000429051 KANK3Q6NY19 840 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 RTL10Q7L3V2 364 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 SYCP3Q8IZU3 236 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 BEST2Q8NFU1 509 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
RCC1-208ENST00000429051 EDAQ92838 391 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 LRFN3Q9BTN0 628 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 STRA6Q9BX79 667 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 ASB7Q9H672 318 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 TBC1D7Q9P0N9 293 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 CDH22Q9UJ99 828 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 DERAQ9Y315 318 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
RCC1-208ENST00000429051 FAM86C2PA6NEL3 165 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 ANKRD63C9JTQ0 380 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 I3L4J1 428 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 POLR2DO15514 142 aaKnown RBP12.51□□□□□ -0.41
RCC1-208ENST00000429051 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
RCC1-208ENST00000429051 RFPL2O75678 378 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 ZMYND10O75800 440 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 IL18RAPO95256 599 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 PAPLNO95428 1278 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
RCC1-208ENST00000429051 ADRB2P07550 413 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
RCC1-208ENST00000429051 LRPAP1P30533 357 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 HOXA9P31269 272 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 ASIC1P78348 528 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 SPAG1Q07617 926 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 RAB33AQ14088 237 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 ZBTB6Q15916 424 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 PTPN21Q16825 1174 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
RCC1-208ENST00000429051 RESP18Q5W5W9 173 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 CD300LGQ6UXG3 332 aa12.51□□□□□ -0.41
RCC1-208ENST00000429051 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms